Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01670 ATGGCGAAGTCATCACAGAAAAACAGCTCAAATGATAGCAATAATAATAATCAGAGTTCAACTACCAGTACTACTGTCACCAAGGTGAAAAGAACCAGGAGAAGCGTCCCCAGAGACTCCCCTCCTCAACGTAGTTCAATATATCGGGGAGTCACTAGGCACCGGTGGACGGGGAGATATGAAGCTCATTTGTGGGACAAGAATTGCTGGAATGAATCACAAAACAAGAAAGGCAGACAAGGTGCTTACGATGATGAAGAAGCTGCAGCACATGCTTATGATCTAGCTGCATTGAAATACTGGGGTGAAGATACAATTCTCAACTTTCCGGCATCCACTTATGAGAAGGAGATTAAAGAAATGGAAGCTCAATCCAGAGAAGAGTACATTGGATCACTAAGAAGGAAAAGTAGTGGATTCTCGCGAGGAGTTTCCAAATATAGAGGCGTTGCCAGACACCATCATAATGGAAGGTGGGAAGCCAGAATTGGAAGAGTTTTCGGCAACAAGTATCTTTACCTTGGAACTTACGCTACTCAAGAAGAAGCTGCCACAGCATATGATATGGCGGCTATTGAATACCGTGGGCTTAACGCAGTTACTAACTTTGATCTTAGCCGTTATATCAAATGGCTTAAACCTAACACCATTGCAAACAATACTAACGATAACAGCATGGTTAACATTAATCCTACTCTGCCTAACATTAATCCAAACCCTAAACAGGAACCAGCAGCTGCTTTGAACTTTTTCCGCAACCAGCCATCTTCCTTAATCAACCATGGGGAGTCAATGCTGACGGCCTCTCAACCAAAGTCAACGATTGCCACGTCAGCTCTAGGGCTTCTTCTTCAATCATCAAAGTTTAAGGAGATGATGGAGATGACAGACATGACTACATCTACGGTTGCTGATCAGTTTGTATCATCATCAACCCAACCAGCTGATGATCAGTCCGAATTGCCACAGTGCTCATTCCCTAAGGATATACAGACATACTTTGCTTGTGATAACTCCACTAATTACAGTGAGGGAGATGAATTTGTCTTTGGCGATCTCAACTCCTTTAATCCCGCAATGTTCCAATGCGACTTTGAAGCATGA 1104 0.4312 MAKSSQKNSSNDSNNNNQSSTTSTTVTKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGEDTILNFPASTYEKEIKEMEAQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNTIANNTNDNSMVNINPTLPNINPNPKQEPAAALNFFRNQPSSLINHGESMLTASQPKSTIATSALGLLLQSSKFKEMMEMTDMTTSTVADQFVSSSTQPADDQSELPQCSFPKDIQTYFACDNSTNYSEGDEFVFGDLNSFNPAMFQCDFEA* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01670 367 ProSiteProfiles AP2/ERF domain profile. 47 110 IPR001471 GO:0003700|GO:0006355
Pte2g01670 367 MobiDBLite consensus disorder prediction 1 47 - -
Pte2g01670 367 ProSiteProfiles AP2/ERF domain profile. 146 204 IPR001471 GO:0003700|GO:0006355
Pte2g01670 367 SUPERFAMILY DNA-binding domain 145 206 IPR016177 GO:0003677
Pte2g01670 367 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Pte2g01670 367 PRINTS Ethylene responsive element binding protein signature 186 206 IPR001471 GO:0003700|GO:0006355
Pte2g01670 367 FunFam AP2-like ethylene-responsive transcription factor 46 112 - -
Pte2g01670 367 Gene3D AP2/ERF domain 145 206 IPR036955 GO:0003700|GO:0006355
Pte2g01670 367 Gene3D AP2/ERF domain 47 113 IPR036955 GO:0003700|GO:0006355
Pte2g01670 367 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 267 - -
Pte2g01670 367 CDD AP2 145 206 IPR001471 GO:0003700|GO:0006355
Pte2g01670 367 SMART rav1_2 47 116 IPR001471 GO:0003700|GO:0006355
Pte2g01670 367 SMART rav1_2 146 210 IPR001471 GO:0003700|GO:0006355
Pte2g01670 367 SUPERFAMILY DNA-binding domain 46 112 IPR016177 GO:0003677
Pte2g01670 367 Pfam AP2 domain 47 103 IPR001471 GO:0003700|GO:0006355
Pte2g01670 367 Pfam AP2 domain 145 196 IPR001471 GO:0003700|GO:0006355
Pte2g01670 367 MobiDBLite consensus disorder prediction 1 30 - -
Pte2g01670 367 FunFam AP2-like ethylene-responsive transcription factor 145 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01670 Pte-Chr2 35706277 35708798 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01670 43 247 AP2-EREBP Transcription Factor Family AT5G57390 61.538 5.41e-86 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Pte2g01670 AP2 2.2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01670 K09285 - qsa:O6P43_022231 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01670 2 35706277 35708798 Pte2g01670 2 35706277 35708798 RCT