Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01669 ATGCCTGCAATGCACCGGTGGACGGGGAGATATGAAGCTCATTTGTGGGACAAGAATTGCTGGAATGAATCACAAAACAAGAAAGGCAGACAAGGTGCTTACGATGATGAAGAAGCTGCAGCACATGCTTATGATCTAGCTGCATTGAAATACTGGGGTGAAGATACAATTCTCAACTTTCCGGCATCCACTTATGAGAAGGAGATTAAAGAAATGGAAGCTCAATCCAGAGAAGAGTACATTGGATCACTAAGAAGGAAAAGTAGTGGATTCTCGCGAGGAGTTTCCAAATATAGAGGCGTTGCCAGACACCATCATAATGGAAGGTGGGAAGCCAGAATTGGAAGAGTTTTCGGCAACAAGTATCTTTACCTTGGAACTTACGCTACTCAAGAAGAAGCTGCCACAGCATATGATATGGCGGCTATTGAATACCGTGGGCTTAACGCAGAACCAGCAGCTGCTTTGAACTTTTTCCGCAACCAGCCATCTTCCTTAATCAACCATGGGGAGTCAATGCTGACGGCCTCTCAACCAAAGTCAACGATTGCCACGTCAGCTCTAGGGCTTCTTCTTCAATCATCAAAGTTTAAGGAGATGATGGAGATGACAGACATGACTACATCTACGGTTGCTGATCAGTTTGTATCATCATCAACCCAACCAGCTGATGATCAGTCCGAATTGCCACAGTGCTCATTCCCTAAGGATATACAGACATACTTTGCTTGTGATAACTCCACTAATTACAGTGAGGGAGATGAATTTGTCTTTGGCGATCTCAACTCCTTTAATCCCGCAATGTTCCAATGCGACTTTGAAGCATGA 828 0.4432 MPAMHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGEDTILNFPASTYEKEIKEMEAQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAEPAAALNFFRNQPSSLINHGESMLTASQPKSTIATSALGLLLQSSKFKEMMEMTDMTTSTVADQFVSSSTQPADDQSELPQCSFPKDIQTYFACDNSTNYSEGDEFVFGDLNSFNPAMFQCDFEA* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01669 275 Gene3D AP2/ERF domain 96 160 IPR036955 GO:0003700|GO:0006355
Pte2g01669 275 Gene3D AP2/ERF domain 3 64 IPR036955 GO:0003700|GO:0006355
Pte2g01669 275 ProSiteProfiles AP2/ERF domain profile. 97 159 IPR001471 GO:0003700|GO:0006355
Pte2g01669 275 SUPERFAMILY DNA-binding domain 4 63 IPR016177 GO:0003677
Pte2g01669 275 CDD AP2 96 158 IPR001471 GO:0003700|GO:0006355
Pte2g01669 275 ProSiteProfiles AP2/ERF domain profile. 1 61 IPR001471 GO:0003700|GO:0006355
Pte2g01669 275 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 179 - -
Pte2g01669 275 Pfam AP2 domain 96 147 IPR001471 GO:0003700|GO:0006355
Pte2g01669 275 SMART rav1_2 4 67 IPR001471 GO:0003700|GO:0006355
Pte2g01669 275 SMART rav1_2 97 165 IPR001471 GO:0003700|GO:0006355
Pte2g01669 275 SUPERFAMILY DNA-binding domain 96 151 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01669 Pte-Chr2 35687789 35690082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01669 85 158 AP2-EREBP Transcription Factor Family AT5G57390 36.585 2.40e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte2g01669 AP2 4.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01669 K09285 - qsa:O6P43_022231 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01669 2 35687789 35690082 Pte2g01669 2 35687789 35690082 RCT