Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01658 ATGAAAGCACCATATCGGAGTGTAGACATATCCTCTCTATGGTCTCTAATCTCACTTATAAAACAGATAGTACCCCAAAGTCACACTCCCATACTCAGAGCTTACTCGTTGCCAACCATGGAAGCTGGCTCAGGACTCGTCACAGATTCTCAGAATGAACTCTTGGTTATCCAACACCATGAAGAGTCGAAGCCATTGAAGAACGCAGATGGACCAGAGGTCTGCGAGATATGTGGGGATGATGTAGGATTCACGGTGGATGGAGAAATATTTGTCGCTTGTGATGAGTGTGGCTTCCCAGTTTGCAGGCCGTGCTGA 318 0.4686 MKAPYRSVDISSLWSLISLIKQIVPQSHTPILRAYSLPTMEAGSGLVTDSQNELLVIQHHEESKPLKNADGPEVCEICGDDVGFTVDGEIFVACDECGFPVCRPC* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01658 105 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 105 IPR013083 -
Pte2g01658 105 Pfam Zinc-binding RING-finger 64 105 IPR027934 -
Pte2g01658 105 SUPERFAMILY RING/U-box 61 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01658 Pte-Chr2 35560678 35561896 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01658 40 105 Cell Wall Biosynthesis AT5G17420 66.176 1.46e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01658 K10999 - egr:104436022 108.227