Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01657 CAAGTCTGTGAGATCTGTGGTGATGATGTGGGACTTACTGTGGATGGGGATTTATTCGTGGCTTGCAATGAATGTGGTTTTCCTGTGTGTCGTCCATGCTATGAGTATGAAAGAAGGGAAGGTAGCCAAAATTGTCCCCAGTGCAAAACCAAATACAAGCGTCTTAAAGGTAGCGCCAATCATGCATGCACCCGTGTATTATCACCAAACGCAGGAAGTGCAAGATGGGATGAAAAGAAAGAGGAAAGATGGAAAGAGAGGATGGATGATTGGAAATTGCAGCAAGGCAATCTCGGGCCTGAACCAGATGACTCAAATGATCCTGACATGGCCAGGTTAGATGAAGCAAGGCAGCCACTATCAAGAAAAGTGCCAATAGCATCTAGTAAAATCAATCCATACCGAATGGTGATAGTGGCACGGCTTTTTATTCTAGCCTTATTCCTGAGATACAGAATTTTGAACCCAGTGCATGATGCACTTGGACTTTGGTTAACATCTATAATCTGTGAAATCTGGTTTGCGATCTCATGGATTCTTGATCAATTCCCCAAATGGTTTCCTATTGATCGCGAGACTTATCTTGATCGCCTTTCTCTAAGGTATGAGCGTGAGGGTGAGCCGAACATGCTTGCTGCAGTGGACGTCTTTGTCAGTACAGTGGATCCCCTGAAAGAACCTCCTTTGGTTACAGCCAACACTGTTCTTTCCATTCTGGCGATGGATTATCCAGTTGATAAAATATCCTGCTACATTTCTGACGATGGTGCTTCAATGCTTTCATTTGAATCCTTGTCAGAAACAGCAGAATTTGCTAGAAAGTGGGTGCCTTTCTGTAAGAAATTTGCCATAGAACCTCGAGCACCCGAGATGTATTTCTCTGAAAAGATTGACTATCTCAAGGACAAAGTCCAACCCACGTTTGTTAAGGAGCGTCGGGCTATCAAGAGAGAATATGAAGAATTTAAGGTTAGAATCAATGGCCTCGTGGCTAAAGCTCAAAAGGTTCCACCACAAGGTTGGATCATGCAGGATGGGACACCATGGCCAGGAAACAATACAAAGGATCATCCAGGAATGATCCAAGTCTTTCTTGGCCACAGTGGAGGCCTTGATGCTGAAGGGAATGAGCTCCCTCGTTTAGTTTATGTCTCCAGAGAGAAAAGGCCTGGTTTTCAACACCACAAGAAAGCTGGTGCCATGAATGCTCTGATTCGGGTCTCTGCAGTCCTTACTAATGCTCCTTTCATGCTGAACTTGGATTGTGATCATTATATCAACAACAGCAAGGCCGTCCGAGAAGCTATGTGCTTCTTGATGGATCCTCAGCTTGGTAAGAAGGTTTGCTATGTCCAATTTCCCCAAAGGTTTGATGGCATCGATAGGCATGATCGTTATGCCAACAGAAACACAGTCTTCTTTGATATCAACATGAAAGGTCTAGATGGAGTTCAGGGACCTGTATATGTTGGTACTGGGTGTGTCTTTCGAAGGCAAGCTTTATATGGGTACAATCCTCCAAAGGGTCCTAAGCGCCCGAAAATGGTAAGCTGTGATTGCTGCCCATGTTTTGGACGCAGGAAAAAGCTCAAGAAGAATTTTAAGAACGACGCCAATGGAACTGCAGGAAGATTGCAAGATGAGGACAAGGAGCTACTGATGTCCCAGATGAACTTCGAGAAGAAATTTGGGCAGTCTGCTATTTTTGTAACCTCAACGCTAATGGAAGAAGGTGGTGTACCTCCTTCATCAAGTCCAGCAGCCTTGCTTAAGGAAGCTATTCATGTCATCAGTTGTGGCTATGAAGACAAAACTGAATGGGGTACTGAGCTTGGTTGGATTTATGGATCCATCACAGAAGATATCCTGACAGGCTTCAAGATGCATTGCCGTGGTTGGAGGTCTATTTACTGTATGCCAAAGAGAGATGCATTCAAGGGTACAGCTCCCATTAACTTGTCAGATCGACTCAACCAAGTGCTTCGTTGGGCACTCGGCTCCATTGAAATCTTCTTCAGTCACCATTCCCCTTGTTTGTATGGATACAAAGAAGGCAAACTCAAATGGCTCGAGAGACTTGCTTATATCAACACAACTGTATACCCGTTCACATCCATACCTCTTCTTGCCTACTGTATTATTCCTGCTGTCTGCTTGCTCACTGACAAATTCATCATGCCACCGATCAACACTTTTGCCAGTCTTTTCTTCATTGGTCTTTTCATGTCCATCATTGCAACCGGCATTCTTGAGTTGAGGTGGAGTGGCGTTAGCATTGAAGAATGGTGGAGGAATGAACAGTTCTGGGTTATTGGTGGTGTATCAGCACATTTTTTTGCTGTCGTGCAAGGTCTTCTAAAGGTATTGGCAGGAATTGACACAAATTTCACTGTCACTTCTAAGGCAACAGATGATGAGGAGTTTGGAGAACTGTACACATTTAAATGGACTACCCTCCTCATCCCTCCAACGACCATCTTAATCATCAACCTTGTTGGAGTAGTTGCTGGTATTTCAGATGCCATAAACAATGGTTACCAAACTTGGGGGCCTCTATTTGGGAAGCTATTTTTTTCTTTCTGGGTGATTCTTCACTTATACCCCTTCCTTAAAGGTCTCATGGGCCGCCAAAACAGGACTCCAACCATTGTTGTCATTTGGTCAGTGCTTTTGGCATCCATCTTCTCGTTGCTGTGGGTGAGAATCGATCCATTCACTGAGAAAGCCAAGGGACCGGACGTAAAGAAATGTGGAATCAACTGC 2763 0.443 QVCEICGDDVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQNCPQCKTKYKRLKGSANHACTRVLSPNAGSARWDEKKEERWKERMDDWKLQQGNLGPEPDDSNDPDMARLDEARQPLSRKVPIASSKINPYRMVIVARLFILALFLRYRILNPVHDALGLWLTSIICEIWFAISWILDQFPKWFPIDRETYLDRLSLRYEREGEPNMLAAVDVFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYISDDGASMLSFESLSETAEFARKWVPFCKKFAIEPRAPEMYFSEKIDYLKDKVQPTFVKERRAIKREYEEFKVRINGLVAKAQKVPPQGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGVQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGRRKKLKKNFKNDANGTAGRLQDEDKELLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRDAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHSPCLYGYKEGKLKWLERLAYINTTVYPFTSIPLLAYCIIPAVCLLTDKFIMPPINTFASLFFIGLFMSIIATGILELRWSGVSIEEWWRNEQFWVIGGVSAHFFAVVQGLLKVLAGIDTNFTVTSKATDDEEFGELYTFKWTTLLIPPTTILIINLVGVVAGISDAINNGYQTWGPLFGKLFFSFWVILHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTEKAKGPDVKKCGINC 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01657 921 FunFam Cellulose synthase 331 505 - -
Pte2g01657 921 SUPERFAMILY RING/U-box 1 60 - -
Pte2g01657 921 ProSiteProfiles Zinc finger RING-type profile. 3 49 IPR001841 -
Pte2g01657 921 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 342 505 IPR029044 -
Pte2g01657 921 Pfam Zinc-binding RING-finger 1 60 IPR027934 -
Pte2g01657 921 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 117 888 - -
Pte2g01657 921 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 736 IPR029044 -
Pte2g01657 921 CDD mRING-HC-C4C4_CesA 1 51 - -
Pte2g01657 921 Pfam Cellulose synthase 214 915 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pte2g01657 921 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 68 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01657 Pte-Chr2 35554511 35558929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01657 81 921 Cell Wall Biosynthesis AT5G17420 88.493 0.0 1569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01657 K10999 - qsa:O6P43_022215 1618.21