Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01653 ATGTTGCTGCATTTCATTACTTCAATGCAGGCTAGGCCAGACCCAAAGATATCTTGTCCAAAGCGAAAAGCTGTGACATATCCAGCTGCAGTGGACAGTGAGGCCGCTCAATTTGGTTTGAAGAGAAAACCCAGGGAGGATTGGAGCTGTGCTCTATGTCATGTTAGTGCATCTAGCGAAAGAACTTTTAATGCACATATTGGAGGTAAGAAGCACAAGGCCAAGGCAAATGGACTTAGAGCACATGCGAATTCAAACATAATACTATTGCCAAAGGAAAGTGGAAGCACCGAAACTCTTGCAACCAATAGATCAGAGAATTTAGACCTCGGAACTGATTCATTTCATTTGAAAAAAAAACCTAGGGAAGAATGGAGTTGTGCTCTCTGTCGAGTTAGTACAACAGGGGAGACGAGATTTAATGAGCACATCCATGGGAAGAAGCACAAGGCCAAGAAAAAAAGATTGATAGCCCATACGAACTCAAACAAAAAACTAATGCCAAAGGAAATTGAAATTTCTTCCAAGAGGAACGAAGAAACTGCTACAACCAACGGATCAGAGACCTTGTGGTGTGGGGTGTCACTTCAGCCAAAGCAAAAAGAAGACATCGAAGTAGACTCAAATAAACAAAGCAGTGCTGTGATGGGAGTGGACGTCAAAAACGAAGCTAAAAGGAAGGAGAAGTTGAAGTTCTGGTGTGAAATGTGTAGAGTTGGTGCTCATTCCTTAAAGGTAATGGAGTCACATAAACTAGGAAGGAAACACATGGCTCGGATGAAGCATGCAGGTCCTTCTAATAAAACTACCCACTATGTTATTCAAGGAGCAACAGATGATGCTGGCAATGAGAAAGCAATCTGA 864 0.4225 MLLHFITSMQARPDPKISCPKRKAVTYPAAVDSEAAQFGLKRKPREDWSCALCHVSASSERTFNAHIGGKKHKAKANGLRAHANSNIILLPKESGSTETLATNRSENLDLGTDSFHLKKKPREEWSCALCRVSTTGETRFNEHIHGKKHKAKKKRLIAHTNSNKKLMPKEIEISSKRNEETATTNGSETLWCGVSLQPKQKEDIEVDSNKQSSAVMGVDVKNEAKRKEKLKFWCEMCRVGAHSLKVMESHKLGRKHMARMKHAGPSNKTTHYVIQGATDDAGNEKAI* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01653 287 Gene3D Classic Zinc Finger 106 155 - -
Pte2g01653 287 Gene3D Classic Zinc Finger 28 77 - -
Pte2g01653 287 Gene3D Classic Zinc Finger 205 263 - -
Pte2g01653 287 SUPERFAMILY beta-beta-alpha zinc fingers 226 261 IPR036236 -
Pte2g01653 287 SMART ZnF_U1_5 122 156 IPR003604 GO:0003676|GO:0008270
Pte2g01653 287 SMART ZnF_U1_5 229 263 IPR003604 GO:0003676|GO:0008270
Pte2g01653 287 SMART ZnF_U1_5 45 79 IPR003604 GO:0003676|GO:0008270
Pte2g01653 287 PANTHER OS06G0651300 PROTEIN-RELATED 9 92 - -
Pte2g01653 287 Pfam Zinc-finger of C2H2 type 232 256 - -
Pte2g01653 287 Pfam Zinc-finger of C2H2 type 48 72 - -
Pte2g01653 287 Pfam Zinc-finger of C2H2 type 125 149 - -
Pte2g01653 287 SUPERFAMILY beta-beta-alpha zinc fingers 23 80 IPR036236 -
Pte2g01653 287 SMART c2h2final6 232 256 IPR013087 -
Pte2g01653 287 SMART c2h2final6 125 149 IPR013087 -
Pte2g01653 287 SMART c2h2final6 48 72 IPR013087 -
Pte2g01653 287 SUPERFAMILY beta-beta-alpha zinc fingers 109 156 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01653 25 263 C2H2 Transcription Factor Family AT5G61190 27.099 6.24e-14 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01653 2 35493675 35497336 Pte2g01653 2 35493675 35497336 RCT