Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01634 ATGGCCGAGGGAACTCCTGCCGCTCCTGGTCCACGTTATGCGCCTGATGATCCCACACTTCCAAAACCGTGGAAAGGTTTAATTGACGGAAATTCTGGCATGTTGTATTACTGGAATGTTGACACAAATGTCACCCAGTATGAAAAACCGGCTGGTCCTCCTGCATCAGTTTCTGTGTCGAATATGGCTTCAATTCCAGGGGCTCACTCAGTTCAACACAGTGGTGTGCCAGCTTCCCATGGCCAGCAAATGATGCAAGCCCCACAACAACAAGCACAACAAATAAGCCACCCATCAGATCAGCAAGGACAGGCAGTGACTCAACAACAGAGTGCCCTGGTTGGGCAAGTCACTCATCAGCATGCTTCACAAATAGCTCAAGCTGGACAGTTACAGAACTTTCAGCCTGCCCAGTCTATGCAGCAGCAGGTTCTAAATCAGCAACCTGGGCAGCATCAGGGCCCTCAAGTGCCTCCACAAGTAGGTCATCAATTTTCACAACAGCCTAACCAGCAACTGCCACACCAGCTGAGCCAACAAATGCAACAGTCAAGTCATCAAATGCATCAACATGCTCCACCCCAGCAGGTGCTGCATCAGATGGGCCAGCAACTGCCCTCACAGGCCTTCCTATTGCCGCAATATGGGCAAGGAACACAGCACGGGATGCATATGGGACAACCACAGTCATATCAATTTTCCCATCAGCACATGCAGCACATGTCATATCAGCAAAGTGTTCAACAGGTTCAGCTTAATGCGCAAGGCCAACCATCTGGAAATCAACCTGAATTCAAATCAGCTTTCCCTAAGATGGAGGAGTTGGAGTTTCAGAATGGTAAACGAGTTGGGTTTTCACCAAACAAGTATCAACACAATAGTGCATCATCTGTGAACGATAACCAAAGCGTCACCGTTGGTGTCAATTCATCTATGATGCCGCATCTGAACACTCATTCTGGTCAAGCGCAGCAGTTTTTTGGTTCGTCAGGCTCTACACAACAGTCTCCTCCTTCGGTACAGGACCGACAGTGTGGTTCTGATTTGATTCATCAGCAGGGTCCAAGGTATCAAAATCAGATGAGCCCATCAATGATGCTTGGTCAGCCACCAAAAGTCTCACCTGTTGGTGTAATGGGGTATGAGGACAATATAAATGACAAAGGGGGAAGTGAGTATTTCTATAATTCAAAGAAAGAGGGACCTGTCATGGGTCCTCAGCAACCCAATGTCGGGGCTGTATCTGTTTCTAGAAGCCACCAGGAAATGAGGATGACTACTGCACCTTTTCCAAATGTAATGCCTGGTCATTTCAGTGGTGGTCCTGGACATTCCATGCATAATATGTTCAACCATCCATCAGGGGGTCCCCCTCCATTCCCGAACAACTCCGTGGTCAGGCCACCTTTCATGGGACCATCGTCAGTCAATGACCTATCACCTGCTGAAATTTACTGCCAGCAGCATGAAGTTACAGCAACTGGTGGCAATGTTCCAGCACCATTCCTGACATTCGAGGCTGCTGGTTTCCCTCCAGAGATTCTGAGAGAGATATATTCTGCTGGATTCACAAATCCCACGCCTATTCAAGCTCAAACATGGCCAGTTGCTCTACAAAATAGGGACATAGTGGCAATTGCAAAAACAGGCTCGGGAAAGACATTGGGTTATTTGATGCCTGCATTTATGCTTCTTCGACAGCGTCGTAATAATCCTCAGTGTGGCCCAACTGTCTTGGTTTTGGCTCCAACGCGAGAGCTTGCCACCCAGATCCGAGATGAGGCCATTAAATTTGGTCGATCTTCAAGGGTCTCAATTACGTGCTTGTACGGTGGAGCTCCAAAGGGTCCTCAGTTGAAGGAGTTAGACCGTGGAGCAGAAATTGTTGTTGCGACACCTGGTCGGCTTAATGACATACTTGAAAGCAAGAAGATTGATTTTCGTCAAGTTTCACTTATTGTGCTTGATGAGGCTGATCGGATGCTTGATATGGGTTTTGAACCTCAAATCCGTAAGATTATGAATGAAATACCCCCACGAAGACAGACCCTCATGTATACAGCAACCTGGCCTAAAGAAGTAAGAAAAATTGCTAGTGATCTACTTGTAAATCCTGTCCAGGTCAACATTGGAAACGTGGATGAGCTTGTTGCAAATAAGGCAATTACACAGTATGTTGAGGTGGTCCCTCAAATGGAGAAGCAGAGGCGCTTGGAGCAGATACTTAGATCTCAAGAACGTGGTTCTAAGGTCATAATATTTTGCTCCACCAAGAAACTATGTGATCAGCTTGCTCGTAGCATTGGGCAGAAATTTGGTGCTGCAGCGATTCATGGAGATAAGTCTCAGGGTGAGAGAGATTGGGTTTTAAATCAGTTCAGGAGTGGGAAATCCCCAATTCTAGTTGCAACTGATGTTGCTGCTCGTGGCCTTGATATCAAGGATATAAGGGTTGTGATCAACTATGACTTTCCTACTGGGGTTGAGGATTACGTGCATCGGATTGGACGGACAGGGAGGGCTGGTGCTGTCGGAGTGTCATACACCTTTTTCTCGGAGCAAGACTGGAAACATGCTGCTGATTTAATAAAAGTTTTGGAGGGGGCTAACCAGCTTGTGCCCCCAGAGATACGAGAGATGGCTATGCGCGGCCCTCCTAATTTTGGCAAGGATCGGATGAGCAGATTTGACTCCAGTGGAGCTAGTGGCCCTGGACAATGGGATTCTGGTGGCCGAGGGGGCATGAGGGATGGTGGCTTTGGTGGTCGAGGTGGCATGAGGGATGGTGGATTTGGTGGCCGTGGCAGAATGAGAGATGGTGGGTTTGGTGGCCGTGGTGGAATGAGGGATGGTGGATTTGGCGGTCGTGGTGGCATGCGAGATGGTGGGAGAGGTGGTGATTTCTTTTCTGGGCGAGGAAATAGGGGACGTGGCCTTGGTGGCCCAGGGGGTGGTCACATTGGTTGGGGAAGGAATGATCGTGGTCCATATGATCGCTACAACATGGATGGTCGAGGTCGGGGGCGTGGACCAGGACGGTTTGATAATCGAAGAGATATTTCCCAAAGGAGTAGAGGCAGAAGTTACAGTCGCAGTCCTGAAAGGGTACGGACATGGGGCTACAGTAGAAGTCGCAGCAGGAGCAGTAGTAGGAGCTGGAGCAGGGGGCGGAGTCGCAGCCGCAGTCTGTCTCGTGGTCGCAGTCGAAGTCGAAGTCGAGGCTATAGCCGCAGTGTTTCCCGCAGCCGCAGCCGCAGTCGCAGTCGTGATCGCATTTCATATCGTCGCAGTCGCAGTTATGATAGGAATGATAGGTCAGATGGCCAAAGTGTTGGTCAAAAGGACCCTGCATTCTTGGAGACTGAAGGACCTGAAAGAGGGATGTCTCCAATGTCCCCAGTTGGGCAGGACAGTACCATTTTGGGAATTCAGAACCAGGATCAGTTACAGCCAACAGCTGAGTTTGCCAGGCCTATATGTTCAAATGCGGGGGAAGATCTGGCTCATCAATTTACTGGTGGAAATGAGAGTTAG 3534 0.4909 MAEGTPAAPGPRYAPDDPTLPKPWKGLIDGNSGMLYYWNVDTNVTQYEKPAGPPASVSVSNMASIPGAHSVQHSGVPASHGQQMMQAPQQQAQQISHPSDQQGQAVTQQQSALVGQVTHQHASQIAQAGQLQNFQPAQSMQQQVLNQQPGQHQGPQVPPQVGHQFSQQPNQQLPHQLSQQMQQSSHQMHQHAPPQQVLHQMGQQLPSQAFLLPQYGQGTQHGMHMGQPQSYQFSHQHMQHMSYQQSVQQVQLNAQGQPSGNQPEFKSAFPKMEELEFQNGKRVGFSPNKYQHNSASSVNDNQSVTVGVNSSMMPHLNTHSGQAQQFFGSSGSTQQSPPSVQDRQCGSDLIHQQGPRYQNQMSPSMMLGQPPKVSPVGVMGYEDNINDKGGSEYFYNSKKEGPVMGPQQPNVGAVSVSRSHQEMRMTTAPFPNVMPGHFSGGPGHSMHNMFNHPSGGPPPFPNNSVVRPPFMGPSSVNDLSPAEIYCQQHEVTATGGNVPAPFLTFEAAGFPPEILREIYSAGFTNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLMPAFMLLRQRRNNPQCGPTVLVLAPTRELATQIRDEAIKFGRSSRVSITCLYGGAPKGPQLKELDRGAEIVVATPGRLNDILESKKIDFRQVSLIVLDEADRMLDMGFEPQIRKIMNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGNVDELVANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKKLCDQLARSIGQKFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGAVGVSYTFFSEQDWKHAADLIKVLEGANQLVPPEIREMAMRGPPNFGKDRMSRFDSSGASGPGQWDSGGRGGMRDGGFGGRGGMRDGGFGGRGRMRDGGFGGRGGMRDGGFGGRGGMRDGGRGGDFFSGRGNRGRGLGGPGGGHIGWGRNDRGPYDRYNMDGRGRGRGPGRFDNRRDISQRSRGRSYSRSPERVRTWGYSRSRSRSSSRSWSRGRSRSRSLSRGRSRSRSRGYSRSVSRSRSRSRSRDRISYRRSRSYDRNDRSDGQSVGQKDPAFLETEGPERGMSPMSPVGQDSTILGIQNQDQLQPTAEFARPICSNAGEDLAHQFTGGNES* 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01634 1177 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 503 531 IPR014014 GO:0003724
Pte2g01634 1177 Gene3D - 479 712 IPR027417 -
Pte2g01634 1177 Gene3D - 713 884 IPR027417 -
Pte2g01634 1177 ProSitePatterns WW/rsp5/WWP domain signature. 24 50 IPR001202 GO:0005515
Pte2g01634 1177 MobiDBLite consensus disorder prediction 1083 1109 - -
Pte2g01634 1177 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 737 881 IPR001650 -
Pte2g01634 1177 CDD SF2_C_DEAD 722 851 - -
Pte2g01634 1177 SMART ww_5 19 52 IPR001202 GO:0005515
Pte2g01634 1177 MobiDBLite consensus disorder prediction 1050 1082 - -
Pte2g01634 1177 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 654 662 IPR000629 -
Pte2g01634 1177 Pfam Helicase conserved C-terminal domain 734 842 IPR001650 -
Pte2g01634 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 575 858 IPR027417 -
Pte2g01634 1177 ProSiteProfiles WW/rsp5/WWP domain profile. 18 52 IPR001202 GO:0005515
Pte2g01634 1177 SUPERFAMILY WW domain 12 51 IPR036020 GO:0005515
Pte2g01634 1177 SMART ultradead3 522 725 IPR014001 -
Pte2g01634 1177 MobiDBLite consensus disorder prediction 75 108 - -
Pte2g01634 1177 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 534 708 IPR014001 -
Pte2g01634 1177 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 476 881 - -
Pte2g01634 1177 MobiDBLite consensus disorder prediction 884 1138 - -
Pte2g01634 1177 MobiDBLite consensus disorder prediction 1035 1049 - -
Pte2g01634 1177 Pfam DEAD/DEAH box helicase 527 697 IPR011545 GO:0003676|GO:0005524
Pte2g01634 1177 MobiDBLite consensus disorder prediction 321 346 - -
Pte2g01634 1177 FunFam ATP-dependent RNA helicase RhlB 712 884 - -
Pte2g01634 1177 MobiDBLite consensus disorder prediction 992 1032 - -
Pte2g01634 1177 MobiDBLite consensus disorder prediction 137 196 - -
Pte2g01634 1177 MobiDBLite consensus disorder prediction 67 108 - -
Pte2g01634 1177 SMART helicmild6 762 842 IPR001650 -
Pte2g01634 1177 FunFam probable ATP-dependent RNA helicase DDX17 472 711 - -
Pte2g01634 1177 CDD WW 21 50 IPR001202 GO:0005515
Pte2g01634 1177 MobiDBLite consensus disorder prediction 1 25 - -
Pte2g01634 1177 Gene3D - 15 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01634 Pte-Chr2 35238919 35247169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01634 501 882 Eukaryotic Initiation Factors Gene Family AT3G19760 34.204 7.11e-67 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01634 K12823 - qsa:O6P43_003723 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01634 2 35238919 35247169 Pte2g01634 2 35238919 35247169 RCT