Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01627 ATGACAGGAACAGCGCTGGGCATGAGATTCAGGTGGAATCATCTTCCATCTGATTGCGTACCGTTTCTGCTGTTCCTTGTTGTGTTGGTATTTTCAAGAACTGATATATTCTCCTATGGGCAAAAGGCATCGGTAGATGGCATCTTAGCCTCAACCCCACCAGCATCTCCTGATATAGAAAAATGCAATGGCATTTTCTTGACGTACAACTTCATATCAAGGATGAAAGAGTACCCCTATGTGAAGAACATCTCAGCTCAAGCATGGGCTTTCAAGGCAGAGGCGACGATATTGAACGCTGGGGACGAAGAGGTTAAGGCTTGGAAAATGTTCATTGGATTCCATCATAGAGAGATATTGGTGAGTGCAGAAGGAGCTACTCTTTTGGATGCTGGTGATTTTCCTGCAGACGTTTCGAATGGGACCACCTTGGGAGGAAACCCAAAGCAAGACTTGAAAACTTCCATTGATACAGCGGCAGATTTTGAGCAAATTCAGGTAAGGATACCGATTAAAGGGACACAGTTTGGCCTTAGAGCGGGCGGGATTCCTATGCCAAAGACAATTAAGCTTGAGAACGATGGCTTCAAATGTCCCGCACCTCGAGTTCGTGGGACGAGGTCTATGTTTGTTTGCTGTGTTAAGGATCCAAAAGCCAAGGCCAAGAAAATCTCAAGCACAAAGTTCCCTCCTCGTCAACATGGACATCTCACCATAACATATGATGTTCTTCAAGCTTTTACAAACAGTTATCTGGCCCAAGTAACCATAGACAACAACCATCCATTGAGTCGCCTTGACCATTGGAATTTGACATGGGAGTGGCAGAAGGATGAGTTCATTGGCACCATGAGAGGAGCATTCTCACGCAAAAGGGATCCTTCTTCTTGCTTATATGGTCCAGCTGGGAAACACTACAGAGACTTTGACTTCTCAAAAGTCTCAACTTGTGATAGGAAACCCATCATTTCTGATCTTCCTCTTGACAGAAAAGAAGATAAAGAAATTGGGAAATTGCCTTATTGTTGCAGAAATGGAAGCATCTTGCCTATCATTATGGATAAAGAGAAATCAAAGTCTATATTCCAAATGAACGTGTTCAAGCTTCCCCCTGATGACAACAGAACTGCGATCACTCCACCAATGAAATGGAATATCAGAGGTGTCATCACCCCAGATTACAAGTGCAGTGCCCCCATTAGAGTTGACCCTACTGAATTTCCTGATCCAACTGGACTTCAGGCAACAGTGACAGCAGTGGCAAGTTGGCAAATAGTATGCAATATCACTCGTCCCAAGCCAAAGCAAAACCGTTGCTGTGTTTCATTCTCAGCCTTCTACAATGAGTCTATCATTCCATGCCCAACCTGTGCTTGTGGATGTGACCAAAGCTCTTGCAATGCGAATGCACAAGGATTGCTTCTTCCCCCGGAGGCAATTCTTGTGCCATTTGTTAACAGAACTGTAAAGGCAAAAGCTTGGGCTAAACTCAAACACTTCAAGGTACCACATAAGTTGCCTTGTCCCGACAACTGTGGGGTTAGCATCCATTGGCATGTTGCCTCTGATTTCAATGGTGGATGGACGGCAAGGATGACACTGTTCAACTGGGACGATATTGCATTTGAGGATTGGTTTGCTGCAGTGCAGTTCAACAGGGCTTCTCCAGGTTATCAAACTGTGTATTCCTTCAATGGTACTGAGCTGAAATCCCCATATATAAAAGACACCATTTTTTTCCAAGGCTTGGATGGTCAGACTTACTTGATGCCAATGACAAATGGAAGCAGACAATTTGATCCAAAGGTGCCAGGAAAACAGCAGTCAGTTATAGCTTTTACCAAGAAAGGTTTGCGCAACTTTGACATAAAACGCGATGCTTACCCATCAAAGTTGTTCTTCAATGGTGAAGAATGTGCACTGCCTTCATCTTTTCCTTCCGCTGCTGCTGGGAATTTTTCCCATATTAGTATCTTGTCAGCCATATATATCGTAATATTAACAATCATGCTCATATAA 2019 0.4373 MTGTALGMRFRWNHLPSDCVPFLLFLVVLVFSRTDIFSYGQKASVDGILASTPPASPDIEKCNGIFLTYNFISRMKEYPYVKNISAQAWAFKAEATILNAGDEEVKAWKMFIGFHHREILVSAEGATLLDAGDFPADVSNGTTLGGNPKQDLKTSIDTAADFEQIQVRIPIKGTQFGLRAGGIPMPKTIKLENDGFKCPAPRVRGTRSMFVCCVKDPKAKAKKISSTKFPPRQHGHLTITYDVLQAFTNSYLAQVTIDNNHPLSRLDHWNLTWEWQKDEFIGTMRGAFSRKRDPSSCLYGPAGKHYRDFDFSKVSTCDRKPIISDLPLDRKEDKEIGKLPYCCRNGSILPIIMDKEKSKSIFQMNVFKLPPDDNRTAITPPMKWNIRGVITPDYKCSAPIRVDPTEFPDPTGLQATVTAVASWQIVCNITRPKPKQNRCCVSFSAFYNESIIPCPTCACGCDQSSCNANAQGLLLPPEAILVPFVNRTVKAKAWAKLKHFKVPHKLPCPDNCGVSIHWHVASDFNGGWTARMTLFNWDDIAFEDWFAAVQFNRASPGYQTVYSFNGTELKSPYIKDTIFFQGLDGQTYLMPMTNGSRQFDPKVPGKQQSVIAFTKKGLRNFDIKRDAYPSKLFFNGEECALPSSFPSAAAGNFSHISILSAIYIVILTIMLI* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01627 672 Pfam COBRA-like protein 251 430 IPR006918 GO:0010215|GO:0016020
Pte2g01627 672 PANTHER COBRA-LIKE PROTEIN 7 26 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01627 Pte-Chr2 35148123 35150563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01627 7 672 COBRA Gene Family AT3G20580 56.889 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01627 - - qsa:O6P43_000846 915.22