Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01617 ATGGGAGCAATATGCAAGGACTATGTTTATGAATCTATCCTAGGGGATCTCATTCAACCAGCAGGATGGTTAGAATGGAATGGCAACTTCGCCCTTGACACGCTTTATTATGCAGGGATACAGAGTCATCAAAAACAAGTACGAGGCACAGCAATTCACAGCTGGCCATTTTTACAGTCAAATATATGGCTTCCAGCTACCGGAGTACCATATTTTGCTGGTTTAAAAGCCTACATCCTGTCCTGGAAGTGCTGCCAACTAACAAACACCGGCAATTACTCCATAGAATACAACATCTGTAACATATATGCTCAAAAAAGAAGACAGTTTAGGAGAAGACTGGAGATGATGGAATTGATTGCCACCCCTCGAGAAAAATAG 381 0.4199 MGAICKDYVYESILGDLIQPAGWLEWNGNFALDTLYYAGIQSHQKQVRGTAIHSWPFLQSNIWLPATGVPYFAGLKAYILSWKCCQLTNTGNYSIEYNICNIYAQKRRQFRRRLEMMELIATPREK* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01617 126 Gene3D - 2 77 IPR012334 -
Pte2g01617 126 Pfam Pectinesterase 9 44 IPR000070 GO:0030599|GO:0042545
Pte2g01617 126 SUPERFAMILY Pectin lyase-like 9 74 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01617 Pte-Chr2 34800565 34800945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01617 11 75 Carbohydrate Esterase AT3G43270 37.349 4.47e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01617 K01051 - csav:115723340 79.7221