Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01605 ATGTCAACAGTAGCTGGACTTCGTGAAGCCATTGATGCTTGTGTAAAACAAGCTTTATCAGATTCTCGTGAATCTCAAATGAAAGCTCTTCGGACTCTGTCTTCTATCACCAGGGTGAGTCCACAAAACAGAACGGTGGTTGCTCAAACAGATGGAGCCATCCCTGCTATTCTGTCACTCACAAAATCTTCCACCCCACAAATTCAAAATATCGCATTGAGTATTCTTTTCAATCTGTCCTTGAACCCTGATCTGAAGCATCATCTTGCAGATATGGACACCATTTATCAGCTGAATGCCTTGATAATGTCAACGAGCTCTCCAGAACTTAGCAAATTAGCTTCATCAATTATTTGCAGCTTAGCCCTGCTTGACAAGACCAAAGCTAAATTTGGTGTAGCAAGCACAGTGCAGATACTGGTCAAAGTGATTGCTAGCGACCCTGGTCCTGCTTCCCATCATTATCTAAGTTCTTTAGCAGAGTTGGTACGGTTCCATGGAAACTGCACTCTAGCTGTGCGAGCTGGAGCTGTTCCTCTCCTAATTCAAGTGATGGACAGCACTGATGGCGAAGATCTAAGTGGGACATCTCTCTCTATTCTTGGTCTTCTGGCTAGGTTTGATGAAGGGCTGAATGCTTTGAGAAACAGTGAGCATATCGTTAGTAAATTGGTGAACGTGTTAAAAGGAAGGAGCATGCTGAGTAAAGAAGGTGCAGCTGAAATCCTTAGGCGTCTGTTTGATGAGAGTGAAGAATGTATAAAAGAAGCTGTCAGGTTGGCAGATTTCTCGGTAGTGCTTGCTGATCTCTCTGTTAGAGGATCTCCAAGGGCCCGAGAGAAAGCTGGTTTGCTCTTGAAGAAGATAATTGAGGCCAACCTGGATATCTATGTGGAAGACAATAACCCACTGTTCCTCTAG 921 0.4397 MSTVAGLREAIDACVKQALSDSRESQMKALRTLSSITRVSPQNRTVVAQTDGAIPAILSLTKSSTPQIQNIALSILFNLSLNPDLKHHLADMDTIYQLNALIMSTSSPELSKLASSIICSLALLDKTKAKFGVASTVQILVKVIASDPGPASHHYLSSLAELVRFHGNCTLAVRAGAVPLLIQVMDSTDGEDLSGTSLSILGLLARFDEGLNALRNSEHIVSKLVNVLKGRSMLSKEGAAEILRRLFDESEECIKEAVRLADFSVVLADLSVRGSPRAREKAGLLLKKIIEANLDIYVEDNNPLFL* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01605 306 SMART arm_5 40 81 IPR000225 GO:0005515
Pte2g01605 306 SMART arm_5 165 206 IPR000225 GO:0005515
Pte2g01605 306 SMART arm_5 207 248 IPR000225 GO:0005515
Pte2g01605 306 Gene3D - 4 151 IPR011989 -
Pte2g01605 306 PANTHER U BOX DOMAIN-CONTAINING 10 287 - -
Pte2g01605 306 SUPERFAMILY ARM repeat 9 292 IPR016024 -
Pte2g01605 306 Gene3D - 152 295 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01605 Pte-Chr2 34526686 34527924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01605 6 287 U-box Gene Family AT5G67340 28.671 1.64e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01605 - - qsa:O6P43_015668 392.889