Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01603 ATGGATTCTTCTGAACCTATTGCAGATAGCATTACTACTACTCCTGTAAATACCTATGCAAAGAATAAGGCAACTGCTATTATTGCCGCCACTGCAGCAGCGGCATTTATGCCAGACTCTCCTCAAGTACAGGAATCCCCTTTCTTCAGTTACGTGAACAATCTTGCCCAAGGATTCCCTGGACTGAATTCCCCTCTTGTTTTTTCTTCTCCACGCAATAATTCTCTTCGAGAAGCATGTTTCTTGAAAAGGTCGATACTTTCGAATTTTGTATTACAATGTGTCAAACCTCTTGCAGCTTATAGACTTTCAAAATTTGTCAGGTCTCAATCACCCGTTCAACAGAATTCTCACGGCGACAAGAAGTGCAAGAATGTTGCTGATGATCAAGATATTTCCAATAAATTAAGTTCTTCACCATCCAGAGGATTGGCAGCTGATGTTTACAATGACTGCGAAATCAAGTACTATGCGAACAGTGAACCCTGTAATTCTCCCGGATGCATTAATCAATATCTGGCTAATCCTCTGGAGGTTGACTGTGCGGATTCAGTGCCTTCACCTGTCATAGACATAAAACAGTCCAGCGATATTCAAAGACCATCAGTAGGTTACTTAACTCACCTGAAAGATTCCATATCAGAATCTGAAGTGAGAAGGGAACAAGTTGACGGGCATCTGAATATTTCACATCGATCCCAGAAGAAGCTTTTAGAGACAACGTGCAGTGCTGGTTCTTGCAGAAACAAAGTGGACCATAAGCATGTTGAGTGGCTGTCTAATGAATGGCCTAGTATTGGGTCTAGTTTGCCTATGGACTTCGATTCTCATATGCAAGAAGCCATTTTTGCTAGTTTCATGAGGTGCAGAGAGGACAGTCAAAAGCATCGTGGCTTGCTTGGACGTTGCCTTCAATTTGAGGAGTCAACAATCAGTGCTTCTCGAAGCTCCAGCTCTCTACACGCTACACAGAATGTAATTAAGTCAAACTTTCCAGCCCCTCTTGTCAAACCAATTATGCCACTTAGCTCTCACGTAAACCAGAGTTCATCTTTAATGAAGAGTCAACTGATGAAGTTTTCACAACCCAATATTTCCTTAGTGGCTCCCAGATGCAGTGGAGACACCAAGCCCTTGGGGATTGACGTGCATTTGAATAGTATCGTAACTTCTATGCCAACTGGTTACAAAGTAACTGCTAGTACGAGACAAAGAGAGGACTATATGAGTCTGCAGGGGTTAAATTCAAAACACCACACAAACAGTCTCGTCCGGGACAATCTGAAGAGATGCTCAATCACATCACATGAAGCTGAAGCACCTGATGATGAGAAGCATCAGATAAAAGCATCAAACCTAGCAGATTTAGCCAACATCAAGTCTTTTCGCTGCAGGGAGTATTTAAGCCTACCGGGTCCTGGTGAGCAACCAGCAAACACCCTTGCTTATTGTGGCTGTTTTGCTGCTGGAATATACTGTGCTGAACCTTGTTCTTGCCAAGGCTGCTTCAACTGGATTGAGTATGAAGACACGGTTCAAGTGGTTAAGGAACTAATTGAATTCCGCAATCCACTTGCTTTTGCTCCAAAAGTAGTACAGAATGTTCCCGATTACTGTCTTGGTTGTCCTCTGCACGAAGATGGAAATCTAATGACACCATCCTCTGCAAGGCATAAGAAAGGTTGCAATTGCAGAAAATCCATGTGTCTGAAAAAGTATTGTGATTGGTATCAGTCCAAAGTTGGGTGCTTTCTTGGATGCCGATGTGAAGGGTGCCAAAATGTTTATGGCAGGAAAGATGAAAGAACTTGTCGCATGTATCTCAGATTCAACTCTCCCACGGTAATGGTCGCCTCTTGTCTGCTACTTCACTTGGTTGGCGTAGTTCGCCAATTACCCCAATTTGGTCGATTAGCTGAGATCGAAGTATTCAGAGTGTTCGGATTCCAGCAGTAA 1956 0.4305 MDSSEPIADSITTTPVNTYAKNKATAIIAATAAAAFMPDSPQVQESPFFSYVNNLAQGFPGLNSPLVFSSPRNNSLREACFLKRSILSNFVLQCVKPLAAYRLSKFVRSQSPVQQNSHGDKKCKNVADDQDISNKLSSSPSRGLAADVYNDCEIKYYANSEPCNSPGCINQYLANPLEVDCADSVPSPVIDIKQSSDIQRPSVGYLTHLKDSISESEVRREQVDGHLNISHRSQKKLLETTCSAGSCRNKVDHKHVEWLSNEWPSIGSSLPMDFDSHMQEAIFASFMRCREDSQKHRGLLGRCLQFEESTISASRSSSSLHATQNVIKSNFPAPLVKPIMPLSSHVNQSSSLMKSQLMKFSQPNISLVAPRCSGDTKPLGIDVHLNSIVTSMPTGYKVTASTRQREDYMSLQGLNSKHHTNSLVRDNLKRCSITSHEAEAPDDEKHQIKASNLADLANIKSFRCREYLSLPGPGEQPANTLAYCGCFAAGIYCAEPCSCQGCFNWIEYEDTVQVVKELIEFRNPLAFAPKVVQNVPDYCLGCPLHEDGNLMTPSSARHKKGCNCRKSMCLKKYCDWYQSKVGCFLGCRCEGCQNVYGRKDERTCRMYLRFNSPTVMVASCLLLHLVGVVRQLPQFGRLAEIEVFRVFGFQQ* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01603 651 ProSiteProfiles CRC domain profile. 458 597 IPR005172 -
Pte2g01603 651 MobiDBLite consensus disorder prediction 112 141 - -
Pte2g01603 651 SMART CXC_2 557 598 IPR033467 -
Pte2g01603 651 SMART CXC_2 483 508 IPR033467 -
Pte2g01603 651 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 482 504 IPR005172 -
Pte2g01603 651 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 559 594 IPR005172 -
Pte2g01603 651 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 36 445 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01603 Pte-Chr2 34516340 34519941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01603 483 600 CPP Transcription Factor Family AT3G22780 58.475 2.97e-40 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pte2g01603 TCR 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01603 K21776 - qsa:O6P43_019426 350.903