Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01585 ATGTACGAGGATACTTGCAGTTTTCATCTCAACACAACCACAGATGTTACTTCAGAGACTACTCCCTCGTTGGTTGCAGCAGTAGAGAATGGCTTTTCAGAGCATCACATAGTCCCAGATAGCCTCAGAACCTTTGAAGACAATCTCAACCAAAGTCACATGGAGGAATTCTCTTCGTGCCACCAAAACCAGAACCAACTTTGCCTTGACGACGTCCAAGCAGCTGGCCCCATTGCCACTCTCGTCCCCCATCAACAAGAACACATGGGTGTGGACACCAACAACAGTACCTGTAGCAACCATCACATGATGGTAGCTCCATTGTTGCAGGAGGTACAAGGGTCTAATCAGCTTCTCTCCTATGACTCATCCGCATGGGACACCAACTTGAACGAAATTCAGGACTTGGTCCATCATGGCGATCATCATCAACAAGTACAATACCAATTAGACCAACAATTTCAGCAGATTGAGATGCAAAGTGGCATTCAATCTTACAACTCCTCTTCCTTGCCAGACACTACTCATCCTTACCCGACACCAGATCTACTCAACCTTCTCCAACTCCCCAGATGCTCAGGCTCTTTGTTAACAAATTCAAGCATGCCCTTTTCAAACCCGTCTCAGAAAACCGCCGGTAGTTACCAAAACTCATTGGGGTTTCTTGGGGAACTTCAGAGTACTGGGATGGACAACACAATCGGTTCTTCCGTCATGTATGATCCACTCTTCCATCTGAATCTGCCTCCCCAGCCCCCAATATTCAGAGAGCTGTTTCAGTCTTTACCTAATGGCTACAGCTTGCCTACCTCCAGACACGGCTCACTCTTTGGAGGTGCTACTCATGAGATGGATGGAAATGGCGGGGTGTTCCAAGATGCAGATGGGAGACAGTTTGACAATAATGTGCTTCAGTTCTCATCTGGAGACATGCCTTGCTTTGGAAAAGGTTGCAAGGATGGGGAAAACACCAAGCACTTCGCTACTGAGAAACAAAGGAGACAGCATTTGAATAACAAGTACACAACTCTCAGGAATCTTATCCCATGTCCTACCAAGAATGATAGAGCATCCGTCGTTGGAGATGCAATTGGACACATAAAAGAGCTGCTGAGCTCGGTGAGTGAGCTTCAAATGCTTGTGGAGAACAAAAGATACGGGAGGGACAGGAAGAAGAGGCCCAAGACAGAAGGGGATATTGTTGGGGGAGAGGAGATGGAGGATTGTAACATGAAGCCGATCGGTGACTCTGATCATTGTTACAATCGTTCTCTGAGAAGCTCATGGATTCAAAGGAAATCCAAAGACACAGAAGTGGATGTGAGAATCATAGATGACGAAGTCACTATCAAACTGGTCCAGAGAAAGAAGATCAATTGCTTATTGTCTGTGTCCAAGATACTCGATGAGTTCCTGCTGGATCTACAGCATGTTGCAGGGGGCCACATTGGTGACTACTGGAGTTTCTTGTTCAACACCAAAATAAATGTGGGTTCTTCCGTTTATGCAAGTGCCATAGCCAGCAAGATGATGGAGGTAATGGACAGACAGTATGCAGTTGCTATTTCTGATCCTGCGAGGAATTATTAA 1590 0.4604 MYEDTCSFHLNTTTDVTSETTPSLVAAVENGFSEHHIVPDSLRTFEDNLNQSHMEEFSSCHQNQNQLCLDDVQAAGPIATLVPHQQEHMGVDTNNSTCSNHHMMVAPLLQEVQGSNQLLSYDSSAWDTNLNEIQDLVHHGDHHQQVQYQLDQQFQQIEMQSGIQSYNSSSLPDTTHPYPTPDLLNLLQLPRCSGSLLTNSSMPFSNPSQKTAGSYQNSLGFLGELQSTGMDNTIGSSVMYDPLFHLNLPPQPPIFRELFQSLPNGYSLPTSRHGSLFGGATHEMDGNGGVFQDADGRQFDNNVLQFSSGDMPCFGKGCKDGENTKHFATEKQRRQHLNNKYTTLRNLIPCPTKNDRASVVGDAIGHIKELLSSVSELQMLVENKRYGRDRKKRPKTEGDIVGGEEMEDCNMKPIGDSDHCYNRSLRSSWIQRKSKDTEVDVRIIDDEVTIKLVQRKKINCLLSVSKILDEFLLDLQHVAGGHIGDYWSFLFNTKINVGSSVYASAIASKMMEVMDRQYAVAISDPARNY* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01585 529 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 324 386 IPR036638 GO:0046983
Pte2g01585 529 PANTHER TRANSCRIPTION FACTOR BHLH91 61 520 IPR045895 GO:0006355|GO:0048658
Pte2g01585 529 SMART finulus 327 376 IPR011598 GO:0046983
Pte2g01585 529 Pfam Helix-loop-helix DNA-binding domain 324 370 IPR011598 GO:0046983
Pte2g01585 529 Gene3D - 319 386 IPR036638 GO:0046983
Pte2g01585 529 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 321 370 IPR011598 GO:0046983
Pte2g01585 529 CDD bHLH_AtMYC1_like 326 392 IPR045896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01585 Pte-Chr2 32390514 32392489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01585 158 530 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 43.223 3.02e-81 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte2g01585 HLH 2.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01585 - - jre:108994595 499.59