Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01569 ATGCCGCGCCCTACTTTTTACAAACTTATTGTTCCAGCAACCATCCAAGCTAGACAACTGAGGATCCCAGAAAGTTTTTTGAGGAAATTCAGGGATGATCTTTCAAACATTTCGACCATTACTCTTCCAAGTGGTGTTGTCTGGCGCATTGGTTTGAAGAAAGTAGACAATAAAGTTTGGTTTTATGATGGTTGGCAGAACTTTGTCGAGGTTTACTCCATCCGTGTTGGATACTTTCTGGTGTTCAGATATGAAGGAAACTCATCTTTCACTGTTCATATTTTCAATCTGGTTGCATCTGAGATAAATTATAAATCTCCGACTCTACATAATGCTCAAGGGTCTTTATTTGCCAATGAATGTCGGATATTTGATGAAATGGAAGATGAAGATCCTCTTGACATTCTGGGTTCTCTGTCGGGCTTGGCTCACGGATCTTTGCAGAATAAGGCTTTAGCTGGATCTACAGACCAAATGACATCTGAGATGAATTATGGCAGTTCTCCAGCGCTACAGAATTTATTCAATGGGTCAAAAAATGATTGTGTAAACTGGGGAGAAGGTGGGAACCTACAAACTCCAAAGGGGGCTGAAAATTCTACAAAGGACAAAGGTGTTCAATTTAATGCAACTGAATTTAAAAAATCTGCTGATGAGGTAAGATTGCTCGGCTCTAAACCAGAGACACCAAAAACCCAAAAACAAGGAAGAAAGAAGCGCAAAGTTGACCCTAATGGGCAGGAAACGTCTGCTCAACATGGGGACGAAGCAGAAATGCGGTTTAGATTTTATGAAAGTGCTTCTGCAAGAAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGGGCTATAAATTCAGCTAAAGCGTTTGAACCTCCCAATCCTTTCTGCAGGGTAGTCCTTCGGCCATCCTATCTATACAGAGGATGCATAATGTATTTGCCATCCTGCTTTGCAGAAAAAAATCTCAATGGGGTTTCAGGATTCATCAAACTGCAGCTTCCTGATGGAAGGCAGTGGCCAGTGAGATGTCTGTATAGAAGTGGAAGAGCTAAATTAAGTCAGGGGTGGTATGAATTTACATTGGAGAACAACATAGGGGAAGGAGATGTGTGCGTGTTTGAACTGCTGAAGGCGAAGGATGTTGTGCTGAAGGTTACAGTTTTCCGAGTGGTGGAGGAGGCAGCACTTTTGGCCCACCCTTTGCAGGCGCACAATAGTTAG 1221 0.4234 MPRPTFYKLIVPATIQARQLRIPESFLRKFRDDLSNISTITLPSGVVWRIGLKKVDNKVWFYDGWQNFVEVYSIRVGYFLVFRYEGNSSFTVHIFNLVASEINYKSPTLHNAQGSLFANECRIFDEMEDEDPLDILGSLSGLAHGSLQNKALAGSTDQMTSEMNYGSSPALQNLFNGSKNDCVNWGEGGNLQTPKGAENSTKDKGVQFNATEFKKSADEVRLLGSKPETPKTQKQGRKKRKVDPNGQETSAQHGDEAEMRFRFYESASARKRTVTAEERERAINSAKAFEPPNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLNGVSGFIKLQLPDGRQWPVRCLYRSGRAKLSQGWYEFTLENNIGEGDVCVFELLKAKDVVLKVTVFRVVEEAALLAHPLQAHNS* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01569 406 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Pte2g01569 406 PANTHER B3 DOMAIN-CONTAINING 3 385 - -
Pte2g01569 406 SMART B3_2 296 391 IPR003340 GO:0003677
Pte2g01569 406 SMART B3_2 6 98 IPR003340 GO:0003677
Pte2g01569 406 Gene3D - 1 97 IPR015300 -
Pte2g01569 406 MobiDBLite consensus disorder prediction 217 257 - -
Pte2g01569 406 MobiDBLite consensus disorder prediction 186 205 - -
Pte2g01569 406 Pfam B3 DNA binding domain 13 96 IPR003340 GO:0003677
Pte2g01569 406 Pfam B3 DNA binding domain 299 389 IPR003340 GO:0003677
Pte2g01569 406 Gene3D - 273 393 IPR015300 -
Pte2g01569 406 SUPERFAMILY DNA-binding pseudobarrel domain 3 96 IPR015300 -
Pte2g01569 406 SUPERFAMILY DNA-binding pseudobarrel domain 289 389 IPR015300 -
Pte2g01569 406 CDD B3_DNA 294 389 IPR003340 GO:0003677
Pte2g01569 406 CDD B3_DNA 4 96 IPR003340 GO:0003677
Pte2g01569 406 ProSiteProfiles B3 DNA-binding domain profile. 296 391 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01569 Pte-Chr2 31216767 31220294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01569 1 390 B3 DNA Binding Superfamily AT3G18990 54.615 3.49e-138 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte2g01569 B3 8.7e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01569 - - qsa:O6P43_011659 568.155