Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01552 ATGGGGAACGGTTCTCCGGGGCAACCCGATGATTCTGATTCCTCCGACCACAAAAAACCACCAAGCCGTCAAATCCCTCACTTCTCAGCTAGCGGCCGGCGAGGCGAGCCGATCGTGCTTTTCGTTGAAGAAAAAGAACCGAAAGAATGGGTTGCACAAGTGGAGCCCGGCGTTCTCATCACCTTCGTCTCACTCCCGCGTGGCGGGAACGATCTCAAGCGAATCCGATTCAGTCGTGATATGTTCAACAAATGGCAAGCTCAAAGGTGGTGGACTGAGAACTATGACAAGATTATGGAACTTTACAATGTACAGAGACTTCATCGTCAGGCTTTCCCTCTTCCCATTCCTGCAAGATCCGAAGATGAGAGTTCAAAGATTGAATCAGCTGAAGCCAGCACTCCTGCAACGCCTCCACTAACCAAAGAGTGCTTACCACGCAATTTGCACCGTCCAACTGGGTTGGGAGTGGGATACTCATCTTCAGATTCATTTGACCATCGCTCAATGCAATCGCAGTCTCTCCATTATTTTGATTCAGCTGGTCTTAACTCAACACCAAAAGTATCCAACATTAGTGGGGCCAAGACAGAAATTTCATCAATGGATGCTTCAATTAGGAGTAGCTCTTCAAGGGATGCTGACCGCTCAGGAGAGCTATCCATCAGCAATGCCAGTGATCTCGAAACCGAATGGGTTGAACAGGATGAACCTGGGGTATACATCACAATCAGAGCTCTCCCAGGCGGTAAAAGGGAGCTCAGAAGAGTCAGATTCAGCCGAGACAGATTTGGGGAGATGCATGCTCGACTGTGGTGGGAAGAGAACCGTGCCAGGATACACGAACAGTATTTGTAG 858 0.4918 MGNGSPGQPDDSDSSDHKKPPSRQIPHFSASGRRGEPIVLFVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDMFNKWQAQRWWTENYDKIMELYNVQRLHRQAFPLPIPARSEDESSKIESAEASTPATPPLTKECLPRNLHRPTGLGVGYSSSDSFDHRSMQSQSLHYFDSAGLNSTPKVSNISGAKTEISSMDASIRSSSSRDADRSGELSISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSRDRFGEMHARLWWEENRARIHEQYL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01552 285 PANTHER PROTEIN BREVIS RADIX-LIKE 1 26 285 IPR044532 -
Pte2g01552 285 ProSiteProfiles BRX domain profile. 230 285 IPR013591 -
Pte2g01552 285 MobiDBLite consensus disorder prediction 202 221 - -
Pte2g01552 285 MobiDBLite consensus disorder prediction 1 30 - -
Pte2g01552 285 Pfam Transcription factor regulating root and shoot growth via Pin3 48 102 IPR013591 -
Pte2g01552 285 Pfam Transcription factor regulating root and shoot growth via Pin3 229 284 IPR013591 -
Pte2g01552 285 MobiDBLite consensus disorder prediction 118 147 - -
Pte2g01552 285 ProSiteProfiles BRX domain profile. 48 103 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01552 Pte-Chr2 29650509 29655202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01552 40 286 Major Intrinsic Protein MIP AT1G31880 52.174 1.42e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01552 - - mnt:21409969 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01552 2 29650509 29655202 Pte2g01552 2 29650509 29655202 RCT