Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01528 ATGAAGTTCACATGGAAGGCTATCTTCCCAAGCAGTTGTTGCACGGCCCAGCACCTTTCAGCCAAGTCCAGAAGGATTGTGGCACAAACCTCATTTAGGAGAATTTCCATAACAGATTGGAGTAACCAAAGCTTGACTCTTTCAGAGGATCTATCAGTCTCTCTTGCAGTGTCAAACCTTTATGTGTTTACACTTGCAGAGCTTAAGGTGATCACTAATAATTTCTCATCAAGTAACTTTCTCGGAGAAGGTGGGTTTGGACCAGTGCATAAAGGTTTCATTGATGACAAGCTTAGGCCTGGCCTGAAAGCTCAGCCTGTTGCTGTAAAGCTTCTGGATTTGGAAGGTTCACAAGGGCATAAAGAGTGGTTGACTGAGGTGATTTGTCTTGGGCAACTAAGGCATGAAAACCTTGTCAAATTGATTGGATATTGTTGCGAAGGGGAACATAGGTTATTGGTTTATGAATACATGCCAAGAGGCAGCTTGGAGAATCAGCTATTCAGAAGATACACTGCATCATTACCTTGGTCTACAAGAATGAAAGTTGCTCTTGGAGCTGCCAAGGGTCTAGCTTTCCTTCATGACGCAGACAAACCAGTTATATATAGAGACTTCAAAGCTTCTAACATCTTGTTAGATGCTGTAAGTATATATATCCTCTGTCTCTTCTCAACCAGAATCTGCTTAAGTTTTGTTTTCCAACATTTCATTCAATTGGGGGGACATCATATTTATGCAATTCCATCTCTCTGTTCTCTGCAGGACTACACTGCTAAACTATCAGACTTTGGTTTGGCAAAAGATGGGCCAGAAGGAGATGACACTCATGTCTCAACCCGCGTGATGGGAACTCAAGGCTATGCTGCACCAGAATACATCATGACAGGTCACTTGACGGCTATGAGTGATGTATATAGCTTCGGAGTTGTACTGTTGGAGCTACTCACAGGCAGAAGGTCTATGGACAAGAGCAGGCCTACTAGGGAGCAAAATTTAGTAGAGTGGGCAAGGCCAATGTTGAATGATCCCCGCAAAATTGGGAGGATAATGGATCCAAGACTTGAATATCAGTATTCTGAAACGGGGTCTAGAAGGGCAGCTGCATTAGCTTTCCAATGTGTTAGCCATAAGGCTAAGAATAGACCCACTATGAGTACTGTGGTAAACATTTTAGAGACACTTCAAGACGATGAGATTCCTATTAAACCCTTTGTGTATGTAGTTCCAGATGATACTGATTTGCAGCATGAACGGAAATCCCCCAAGTCACCACATACTGAATTGAAAAAAGAAAATGGCCATCGTCACCGGAATCATCATTTGCACCATGTTCATAGGAATGAAAGAAGATCCCCTAATTCCCCAGAGTCCCCTAAACTCTAA 1386 0.4271 MKFTWKAIFPSSCCTAQHLSAKSRRIVAQTSFRRISITDWSNQSLTLSEDLSVSLAVSNLYVFTLAELKVITNNFSSSNFLGEGGFGPVHKGFIDDKLRPGLKAQPVAVKLLDLEGSQGHKEWLTEVICLGQLRHENLVKLIGYCCEGEHRLLVYEYMPRGSLENQLFRRYTASLPWSTRMKVALGAAKGLAFLHDADKPVIYRDFKASNILLDAVSIYILCLFSTRICLSFVFQHFIQLGGHHIYAIPSLCSLQDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSMDKSRPTREQNLVEWARPMLNDPRKIGRIMDPRLEYQYSETGSRRAAALAFQCVSHKAKNRPTMSTVVNILETLQDDEIPIKPFVYVVPDDTDLQHERKSPKSPHTELKKENGHRHRNHHLHHVHRNERRSPNSPESPKL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01528 461 Gene3D Transferase(Phosphotransferase) domain 1 158 403 - -
Pte2g01528 461 MobiDBLite consensus disorder prediction 433 448 - -
Pte2g01528 461 PANTHER OS01G0588500 PROTEIN-RELATED 54 396 - -
Pte2g01528 461 MobiDBLite consensus disorder prediction 413 461 - -
Pte2g01528 461 SUPERFAMILY Protein kinase-like (PK-like) 51 395 IPR011009 -
Pte2g01528 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Pte2g01528 461 Gene3D Phosphorylase Kinase; domain 1 36 157 - -
Pte2g01528 461 FunFam Serine/threonine-protein kinase BIK1 42 157 - -
Pte2g01528 461 Pfam Protein tyrosine and serine/threonine kinase 79 392 IPR001245 GO:0004672|GO:0006468
Pte2g01528 461 ProSiteProfiles Protein kinase domain profile. 75 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01528 461 MobiDBLite consensus disorder prediction 413 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01528 Pte-Chr2 29300130 29302444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01528 41 392 Glycoside Hydrolase AT3G07070 46.197 1.65e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte2g01528 PK_Tyr_Ser-Thr 9.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01528 - - cave:132165293 607.446