Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01520 ATGGCCGCTGGTCGGTTTTTCTTCCTCCATCTTGTTCTTTTCCTTCATCTCTTCTTTCCATATTTCTGTTTCTCACTACCAGAAAAGGATGTCCTTCTCAAGTTCAAGGGTTCTCTCACAAATGCGGGTGCTTTATCAAACTGGAAACTGAACTCTTCTCCATGCAAAGACCATTGGGTTGGAGTAGTTTGCGTGAAAAATGGCATCTCAGGTCTACGTCTCAATGGCATGGATCTATCAGGAAAGATAGACCCGGATGCTCTGCTTCACATTCCCTCCCTTCGAATCATTAGCTTTGAGAACAACTCTTTTAAGGGTCCAATTCCAGATAGTGTATCCAGGTTTGGAGCACAGTCTTTTTCTGGCAATGAAAAGCTTTGTGGGAAGCCTCTGGGTGATGAGTGCAAAGCCATTGATGCCCCACCAAAAGATGCAGCCGGCATTTCAGGCCCACCGAAAGATGCAGCCGGCATTTCAGGCCCACCAAGTGGTGAAAGTTCGAGCAAAACAAGTAGTAAGGCCTACATTATCTTCGCTTCTATTGCAGTTGCAGCTGTGGTATTGATTGTTGCGTTTGCTCGGGTGGGAAGGCATAAGGAACAAGATGAGTTCAGTGTGCTTGGGAGAGAAGCCATGGTGGATAAAAAGGTTCAACATGTAGCCAGTGCCACCGCCGACCATCTCCGCCGGGCGCCTTCTGAGTCAGGAAGCAGAAGAGGTGGTGATTCTAGGAGAGGTCAAAGGACTGGTCTGGGTGATATTATAATGGTGAACGATGAAAAGGGTGTGTTTGGATTGCCTGATTTGATGAAGGCAGCTGCAGAGGTTTTAGGAAATGGAGGGCTGGGTTCATCTTATAAAGCTGCCATGGCAAATGGGTTGTCTGTGGTAGTGAAAAGAATGAAAGAGATGAACCGAATGGGCAGAGATGGATATGATGCTGAGATGAGAAGGTTTGGAAGATTAAGACACAAGAATATCTTGACACCTCTAGCTTTCCATTACAGAAGAGAGGAGAAGCTCTTAGTCTCAGAATACGTCCCCAAAGGCAGCTTGCTATATGTCATGCACGGTGATAGAGGAACTTGTCATTCTGAATTAAACTGGCCAACTCGTTTGAAAATTGTCAAGGGAATTGCAAATGGTTTGAGTTTTCTCCATACTGAATATTCTTCCTATGACCTTCCTCATGGAAATCTCAAGTCCAGCAATGTTCTTCTTGGTGAAGATTACGAGCCCCTACTCTCTGACTATGCCTTCCATCCACTAGCCAATCCTTCAAATGCAGTGCAGTCAATGATTGCATTCAAAACCCCAGATTACTTGCGTTACCAGGAAGTTTCACACAAGACTGATGTCTACTGCTTAGGGATTATCATTCTTGAAATTCTCACTGGAAAACTTCCTTCTCAATATTTAGTCAATGGCAAGGGTGGGACAGATGTTGTGCAATTGGTTCACACAGCCATTTCTGAGAAAAAAGCAGCAGAAGTGATTGATCCCCAGATAGCAATAGACACAAATTCATTGAACCAAATGTTGCAACTCCTCCAAATTGGGGCTGCTTGCTCTGAAAGCAGCCCTGAACAACGGTTGACTATGCAAGAAGCCATTAGAAGGATAGAGGAAGTACAGGTATAA 1641 0.4473 MAAGRFFFLHLVLFLHLFFPYFCFSLPEKDVLLKFKGSLTNAGALSNWKLNSSPCKDHWVGVVCVKNGISGLRLNGMDLSGKIDPDALLHIPSLRIISFENNSFKGPIPDSVSRFGAQSFSGNEKLCGKPLGDECKAIDAPPKDAAGISGPPKDAAGISGPPSGESSSKTSSKAYIIFASIAVAAVVLIVAFARVGRHKEQDEFSVLGREAMVDKKVQHVASATADHLRRAPSESGSRRGGDSRRGQRTGLGDIIMVNDEKGVFGLPDLMKAAAEVLGNGGLGSSYKAAMANGLSVVVKRMKEMNRMGRDGYDAEMRRFGRLRHKNILTPLAFHYRREEKLLVSEYVPKGSLLYVMHGDRGTCHSELNWPTRLKIVKGIANGLSFLHTEYSSYDLPHGNLKSSNVLLGEDYEPLLSDYAFHPLANPSNAVQSMIAFKTPDYLRYQEVSHKTDVYCLGIIILEILTGKLPSQYLVNGKGGTDVVQLVHTAISEKKAAEVIDPQIAIDTNSLNQMLQLLQIGAACSESSPEQRLTMQEAIRRIEEVQV* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01520 546 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 114 IPR046959 -
Pte2g01520 546 ProSiteProfiles Protein kinase domain profile. 271 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01520 546 Gene3D Ribonuclease Inhibitor 27 122 IPR032675 -
Pte2g01520 546 MobiDBLite consensus disorder prediction 231 246 - -
Pte2g01520 546 Gene3D Phosphorylase Kinase; domain 1 251 346 - -
Pte2g01520 546 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Pte2g01520 546 MobiDBLite consensus disorder prediction 221 250 - -
Pte2g01520 546 Gene3D Transferase(Phosphotransferase) domain 1 347 546 - -
Pte2g01520 546 MobiDBLite consensus disorder prediction 140 166 - -
Pte2g01520 546 SUPERFAMILY Protein kinase-like (PK-like) 275 541 IPR011009 -
Pte2g01520 546 Pfam Protein kinase domain 275 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01520 546 SUPERFAMILY L domain-like 26 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01520 Pte-Chr2 29240015 29242716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01520 12 547 Receptor kinase-like Gene Family AT3G42880 44.006 9.78e-171 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte2g01520 Pkinase 5.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01520 - - qsa:O6P43_022510 535.413