Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01518 ATGTCTAGCTCATCGGAGTTTTCAAGTCTGACAGCGAAGTCGGCGGAGAAACCTTCGACTTTCTCTCAGACGTGTAGTTTGTTGAGTCAGTATCTCAAAGAGAAAGGCAGTTTTGGGGATCTAAACCTTGGGATGACATGCAACCCTGATACAAACGTTTCTTCAGAGATGTGTCGTCAGAGATCAACTACTACTATGAATCTGTTTCCAGTGGGGGACAAATCTGGAAATATCTCAACCGAAAATACCATGACGACGACACCACAACCATGGAATCTTACATCTACAAGCTTATTTCCTCAGAGAACTGCTCCTAATCCCTTCTTGTCAGAGGAAAATATTCCAAAGATGGCCTATGCCAATTCAAGTATTGTCAATAAGGCTGCTGCTGAAGAGAACAAGAACCCACAAATGACAATCTTCTATGCTGGTCAAGTGTATGTCTTTGATGATTTTCCAGCAGACAAAGTTAAGGATGTGATGTCGTTGGCCACTAAAACTAGCTCCCAGAATAACCATCACCCAGTTGCTCGTAAAATTGTGCCAAGTCCAGAGAACCCCAGTAGCCCAGTTTCTACAAATATTAACAGTACTGCATCAGCTACAAATCATTTTATCCCAGAGCGTAGTCAACAACAACAAACTATACCTGTTGTTCGTGATCTACCTATTGCTAGGAAAGCTTCACTTCATCGATTTTTGGAGAAGAGAAAAGACAGAATTGCCTCAAAAGCACCGTATCAGACAAGCAGCCCAGTCTCAGGAAAGCCTGGAGCAGAAGGCGAGCCATGGCTTGGTTTGGCTGCTCAAGTACCTCAATGA 822 0.4331 MSSSSEFSSLTAKSAEKPSTFSQTCSLLSQYLKEKGSFGDLNLGMTCNPDTNVSSEMCRQRSTTTMNLFPVGDKSGNISTENTMTTTPQPWNLTSTSLFPQRTAPNPFLSEENIPKMAYANSSIVNKAAAEENKNPQMTIFYAGQVYVFDDFPADKVKDVMSLATKTSSQNNHHPVARKIVPSPENPSSPVSTNINSTASATNHFIPERSQQQQTIPVVRDLPIARKASLHRFLEKRKDRIASKAPYQTSSPVSGKPGAEGEPWLGLAAQVPQ* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01518 273 Pfam tify domain 135 164 IPR010399 -
Pte2g01518 273 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 12 254 IPR040390 -
Pte2g01518 273 ProSiteProfiles Tify domain profile. 131 166 IPR010399 -
Pte2g01518 273 SMART tify_2 131 166 IPR010399 -
Pte2g01518 273 Pfam Jas motif 223 248 IPR018467 -
Pte2g01518 273 MobiDBLite consensus disorder prediction 165 197 - -
Pte2g01518 273 MobiDBLite consensus disorder prediction 237 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01518 Pte-Chr2 29203722 29205594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01518 1 271 Tify Gene Family AT1G19180 41.637 6.84e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte2g01518 tify 6.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01518 K13464 - qsa:O6P43_022511 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01518 2 29203722 29205594 Pte2g01518 2 29203722 29205594 RCT