Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01512 ATGGTGAGGCCTGCAACTGAGACGTCAGCTGAGAGAAGTGATCCCAAGTACAAAGGAATACGGAAGAGGAAATGGGGCAAATGGGTATCTGAAATCAGATTACCCAATAGCAGGGAGAGGATTTGGTTGGGGTCTTACGATACAGCGGAAAAGGCGGCGCGTGCTTTCGACGCTGCACTGTACTGCTTACGAGGACAGTCTGCTAAGTTTAACTTCCCTGATAACCCGCCTGATATCCCAGGAGGAAGGTCGCTAGCGCCTCCTGAGATACAAGCTGCGGCGGCACAGTTTGCAAACTCAGAATCGGAGCATCCCAAGAGTAGCACGCATCAGGGTGTGCCTGAGTTGCAGATGATGATGGAATCTCCGTCTCCTTCGATTTCGGATGGGATGGCACAAACGGACAGTGATGTCACGCTAAACGGGTCGCTTTTTGGCATGTTCGGCTCAGTGGGTTCAGGTAGCAACACATCGGATTACGGGTTGTTTCCGGGTTTTGACGACTTAGTGTCACCCATGATGCCAACTACTGACTATGAAGAAGAAACGTTGGATGGGACGATCGATGATTCATTTTTGTGGAATTTCTGA 591 0.5025 MVRPATETSAERSDPKYKGIRKRKWGKWVSEIRLPNSRERIWLGSYDTAEKAARAFDAALYCLRGQSAKFNFPDNPPDIPGGRSLAPPEIQAAAAQFANSESEHPKSSTHQGVPELQMMMESPSPSISDGMAQTDSDVTLNGSLFGMFGSVGSGSNTSDYGLFPGFDDLVSPMMPTTDYEEETLDGTIDDSFLWNF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01512 196 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Pte2g01512 196 FunFam Ethylene-responsive transcription factor 2 16 74 - -
Pte2g01512 196 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 10 121 - -
Pte2g01512 196 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Pte2g01512 196 Gene3D AP2/ERF domain 16 74 IPR036955 GO:0003700|GO:0006355
Pte2g01512 196 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
Pte2g01512 196 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Pte2g01512 196 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Pte2g01512 196 Pfam AP2 domain 15 65 IPR001471 GO:0003700|GO:0006355
Pte2g01512 196 SUPERFAMILY DNA-binding domain 16 74 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01512 Pte-Chr2 28940460 28941665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01512 7 197 AP2-EREBP Transcription Factor Family AT1G19210 52.451 1.44e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte2g01512 AP2 1.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01512 - - csav:115704711 261.151