Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01510 ATGAAGGCTCCTTCCAATGGTTTCTTGCCAAATTCTGGTGACGGAGAACAAAAGACCATCAATTCAGAATTATGGCACGCTTGTGCTGGACCTCTGGTTTCCTTGCCACCTGTAGGAAGTCTTGTGGTTTACTTCCCTCAAGGACACAGTGAGCAAGTTGCAGCATCTATGCACAAGGAGACTGATTTCGTACCCAGCTACCCTGACCTCCCTTCCAAGTTGATTTGCATACTTCATAACATCACATTACATGCGGATCCTGAAACACATGAGGTCTATGCGCAGATGACACTTCAACCTGTAAACAAATATGACAAAGAAGCATTATTGGCATCTGACATGGGTCTTAAGCAAATCAGACAACCTGCTGAGTTTTTCTGTAAAACCCTCACAGCTAGTGACACAAGCACTCATGGTGGATTCTCTGTACCTCGCAGATCAGCAGAGAAGATCTTCCCTCCTCTTGACTTCTCAATGCAACCGCCTGCTCAGGAGCTAGTAGCTAAAGATTTGCATGAAAACACATGGACATTCAGGCATATTTATCGCGGCCAACCAAAAAGGCACCTACTGACCACTGGCTGGAGTATTTTTGTCAGCACAAAAAGATTGTTTGCTGGAGATTCTGTTGTTTTTATAAGAGATGAAAAGTCACAACTTCTTTTGGGTATAAGACGTGCTAATAGACAGCAGCCAGCTCTCTCTTCATCAGTCATTTCAAGTGACAGCATGCACATCGGCGTTCTTGCTGCAGCTGCACATGCTGCTGCAAATAGTAGCCCTTTTACTATCTTTTACAATCCGAGGGCCAGCCCTTCGGAGTTTGTGATTCCACTGGCAAAATATTATAAAGCTATGTATACTCAAGTTTCCCTTGGAATGAGGTTCAGAATGATGTTTGAGACAGAGGATTCAGGAGTTCGCAGATACATGGGTACAATAACTGGCATCACTGACTTGGATCCTGTGAGGTGGAAAAATTCACAATGGCGCAATCTTCAAGTTGGATGGGATGAATCAACGTCTGGGGAGCGACCCAGCAGGGTATCACTTTGGGAGATAGAGCCTGTCGTGACTCCATTCTACATTTGTCCACCTCCATTCTTTAGACCCAAGCTTCCCAAGAGAATGCCTGATGATGAATCTGATAATGAGAATGCTTTCAAAAGAGCTATGCCGTGGATGGGAGATGATTTTGGCTTGAAGGATGCTTCAAGTTCAATATTTCCTGGTTTAAGTTTAGTGCAGTGGATGAGCATGCAGCAGAATAACCAGCATTCTCCTGCTGCTCAATCAGGAATGTTTCCGTCCATGTTTTCAGCAAACTCTGTGCATAACAACCTTACCACTGACGATCCATCCAAATTATTAAGCTTTCAAGCCCCAGTCATGTCTCCTCCGAGTCTACAATATAAAGCAAATCCACAAAACCAAGTCAATCAGTTGCAGCAGCCACCTGTAACATGGCCCCAACAGCAACAGATGCAGCCATTGTTTCAAAGTCCTATTAACCAGTTGCAGCAGCAAAGACAACAGCAACAGCAACCAAATCCTCAGGAATTACTGAACATGCAACAGCAGCAGCAGCCTCAGCAGCAGAAACAATTAGGTCCACAACCTCCTGTAAATAATGTAGTAGTTGCTTCTAACGTCATTTCAAGTCAAAGCATGCAGCAACCAGTACAGTACTCTCAGTTTCAGCCACAACAGTCACTGGCAGGCAGCATCTCGACGCAGCAGGGTGTGCATTCTGCTAGCAAAACTTCATTTCCTTTGACATCCTTGCCTCAAGATTCAGAATTTCTGCAACAGGTAGAGCAGTCGCCTACTCTTTTACAGAGGCAGCAGCAACAGACTCAGTTGCAGCAGTCCTCATTACAGTTATTGCAACAAAGTCTATCGCAGAGGACCCTTCAACAACTGCAAGTGCCACAACTGTCACAGCAAAACCTGTCTGCACAGCAACTGCAGTTTCAGTTACTACAAAAATTGCAGCAACAGCAAGTGCCGCAACTAGCGCAGCAAAACCTGTCCGAGCAGCAACTAAAGTTGCAGTTGCTGCAAAAACTGCAGCAGCTACAGCAGCAGCAGCAGCAACCACAGTTAGTTTGCCCAACTAGCACACTGTTGCAGCCCCAGTTGCACCAACCACAGCTCACGAATGAACAATACCAGCCATCACAACAGTTCCCTTTGTCTCATCATCTGCCACAACAGCTCACCAGCAATGGTTTCACTACGGATAAGCTTCTCAACGGCAACAGCTTCTCATCTTCTGCACCGACCCAATCACAACAACTCCCAGTTAGCCAACCTCAAAGTATGCACAAACCACCAACAATTACAAGTGTTCCTTCTGGGCTCACAGACGGTGATGCTCCATCGTGCTCTACATCACCATCAACTAATATCTGCCAGGTACCGCCTCCAAACCTCTTCAACAAGAATCTGCAAGGGCCACTGCCATTATTAGGGGTAAATACTGCAGTGCAGCCCATGAATAGCATGGCTCAGGAGCTTCAAAGCAAATCCGATGTGCAGAACAAACATGAGTTATCCTGTGTAAAATGGCCAGAGCAAATAAAGTTCAAAGGCGCTGTCACAGATCAATTGGAAGCTTCTTCTTCTGGAACATCATATTGTCTTGATCCTAGTAATATTCCCCAGAGTTTTCCAATTCCAGCCTTCTGTATGGATGATGATGTCCAGTCTCACCCTCGTAGTAATATTCTTCTAGCTTCTAATATTGATGGATTGGAACCTGACACTTTACTTTCAAGGGGATATAACTCTCAGAAAGACCTGCAAAATTTGCTTTCTGACTATAGTGAGGCTCCAAGGGATATCGAGACAGAGGTATCAACTGCTGCTATTAGTTCTCAGTCATTTGGGGTCCCCAATATTCCTTCTAAACCTGGTTGCTCTAATGATATTGCGATCAATGATACTGGCATATTAAGCAACGGATTGTGGACCAATCAGGCCCAACGCTTGAGAACGTTTACTAAGGTGCAAAAACGTGGATCCGTGGGAAGATGTATTGATGTTACCCGATACAAGGGATATGATGAACTTCGGCATGATATAGCTCGCATGTTTGGGATTGAAGGGCAGCTGGATGATCCTCAGAGAACTGACTGGAAGTTAGTCTATGTAGATCATGAAAATGACATACTTCTTGTTGGAGATGACCCTTGGGAAGAGTTCGTGAGTTGTGTGCAGAGCATAAAGATATTGTCATCTGTGGAAGTGCAGCAGATGAGCTTAGATGGAGACCTGGGTAATGTTCCAATTCCCAATCAATCTTGTAGTGGAACGGATAGTGCTAATGTATGGAGGGCACAGTACGATGATAATTCTGCTGCCTCCTTCAATCGCTAG 3381 0.4496 MKAPSNGFLPNSGDGEQKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKETDFVPSYPDLPSKLICILHNITLHADPETHEVYAQMTLQPVNKYDKEALLASDMGLKQIRQPAEFFCKTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQELVAKDLHENTWTFRHIYRGQPKRHLLTTGWSIFVSTKRLFAGDSVVFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYYKAMYTQVSLGMRFRMMFETEDSGVRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESTSGERPSRVSLWEIEPVVTPFYICPPPFFRPKLPKRMPDDESDNENAFKRAMPWMGDDFGLKDASSSIFPGLSLVQWMSMQQNNQHSPAAQSGMFPSMFSANSVHNNLTTDDPSKLLSFQAPVMSPPSLQYKANPQNQVNQLQQPPVTWPQQQQMQPLFQSPINQLQQQRQQQQQPNPQELLNMQQQQQPQQQKQLGPQPPVNNVVVASNVISSQSMQQPVQYSQFQPQQSLAGSISTQQGVHSASKTSFPLTSLPQDSEFLQQVEQSPTLLQRQQQQTQLQQSSLQLLQQSLSQRTLQQLQVPQLSQQNLSAQQLQFQLLQKLQQQQVPQLAQQNLSEQQLKLQLLQKLQQLQQQQQQPQLVCPTSTLLQPQLHQPQLTNEQYQPSQQFPLSHHLPQQLTSNGFTTDKLLNGNSFSSSAPTQSQQLPVSQPQSMHKPPTITSVPSGLTDGDAPSCSTSPSTNICQVPPPNLFNKNLQGPLPLLGVNTAVQPMNSMAQELQSKSDVQNKHELSCVKWPEQIKFKGAVTDQLEASSSGTSYCLDPSNIPQSFPIPAFCMDDDVQSHPRSNILLASNIDGLEPDTLLSRGYNSQKDLQNLLSDYSEAPRDIETEVSTAAISSQSFGVPNIPSKPGCSNDIAINDTGILSNGLWTNQAQRLRTFTKVQKRGSVGRCIDVTRYKGYDELRHDIARMFGIEGQLDDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSVEVQQMSLDGDLGNVPIPNQSCSGTDSANVWRAQYDDNSAASFNR* 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01510 1126 FunFam Auxin response factor 124 228 - -
Pte2g01510 1126 CDD B3_DNA 125 226 IPR003340 GO:0003677
Pte2g01510 1126 FunFam Auxin response factor 289 361 - -
Pte2g01510 1126 Pfam AUX/IAA family 997 1085 IPR033389 -
Pte2g01510 1126 SUPERFAMILY DNA-binding pseudobarrel domain 117 255 IPR015300 -
Pte2g01510 1126 ProSiteProfiles PB1 domain profile. 999 1092 IPR000270 GO:0005515
Pte2g01510 1126 Gene3D - 289 360 - -
Pte2g01510 1126 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Pte2g01510 1126 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 1088 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pte2g01510 1126 Gene3D - 124 227 IPR015300 -
Pte2g01510 1126 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Pte2g01510 1126 Gene3D - 994 1088 - -
Pte2g01510 1126 SMART B3_2 126 228 IPR003340 GO:0003677
Pte2g01510 1126 MobiDBLite consensus disorder prediction 574 593 - -
Pte2g01510 1126 MobiDBLite consensus disorder prediction 503 542 - -
Pte2g01510 1126 FunFam Auxin response factor 994 1088 - -
Pte2g01510 1126 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pte2g01510 1126 Coils Coil 676 699 - -
Pte2g01510 1126 SUPERFAMILY CAD & PB1 domains 1014 1077 - -
Pte2g01510 1126 MobiDBLite consensus disorder prediction 738 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01510 Pte-Chr2 28893798 28901356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01510 1 634 B3 DNA Binding Superfamily AT1G19220 69.782 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pte2g01510 AUX_IAA 1.7e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01510 K14486 - zju:107404980 1464.9