Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01509 ATGAAGGCTCCTTCCAATGGCTTCTTGCCGAATTCCAGTGAAGGAGAACGAAAGACTATTAATTCAGAATTATGGCACGCATGTGCAGGGTCACTGGTTTCCTTACCACCCGTTGGAAGTCTTGTGGTTTACTTCCCTCAAGGACACAGTGAGCAAGTTGCAGCATCTATGCACAAGGAGACTGATTTCATACCCAGCTACCCTAACCTCCCTTCCAAGTTGATTTGCATGCTTCATAATGTCACATTACATGCGGATCCAGAAACAGATGAGGTCTATGCACAGATGACACTTCAACCTGTAAACAAATACGAGAAAGAAGCTTTGTTGGCATCTGACATGGGCCTTAAACAAACCAGACAACCTGCTGAATTTTTCTGTAAATCCCTCACAGCTAGTGACACTAGCACTCATGGTGGATTCTCTGTACCACGCAGAGCAGCAGAGAAGATCTTCCCAACTCTAGACTTCTCAATGCAACCCCCTGCTCAAGAGCTAGTAGCTAAAGATTTGCACGATAACACATGGACTTTTCGGCATATTTATCGCGGTATCGCTGCATCCAAAAGTCCTCTCTTCCTATGGTCCTCGTTTGATAGTATTGACATACTGCCATTGATGCTTCTAGTAATCATGACATCCTTGTTTACACAATTAAATTTACTGTGCTCCAATTATAGTCACTCCTATCAACTACATGTTTTCATTCTTCTTTCTGTATTTTTATTGAATGAAATTGACTATGGAGCTACTTGGATTTTAGGTCAACCAAAGAGGCACCTGCTGACCACTGGCTGGAGTGTTTTTGTTAGCACAAAAAGATTGTTCGCTGGAGATTCTGTTCTTTTTATTAGAGATGAAAAGGCACAATTGCTTTTGGGTATAAGACGTGCTAATAGACAGCAGCCAGCTCTCTCTTCGTCAGTCATTTCAAGTGACAGCATGCACATTGGTATTCTTGCCGCAGCTGCACATGCTGCAGCAAATAGTAGCCCGTTTTCTATCTTTTACAATCCAAGGGCCAGCCCTTCGGAGTTTGTGATTCCACTAGCGAAATATAGTAAAGCTTTGTACACTCAAGTTTCCCTTGGAATGAGATTCAGAATGATGTTTGAGACTGAGGAGTCAGGAGTTCGCAGATACATGGGTACAATAACTGGCATCGCTGACTTGGATCCAGTGAGGTGGAAAAATTCACAATGGCGCAATCTTCAAGTTGGATGGGATGAATCAACCGCCGGTGAGCGACCCAGCAGAGTATCACTTTGGGAGATAGAGCCTGTTGTCACTCCATTCTACATTTGTCCACCTCCATTCTTTAGACCCAAGTTTCCCAGGCAGCCAGGAATGCCAGATGATGAGTCCGATATTGAGAATGCTTTCAAAAGAGCTATGCCATGGATGGGAGATGATTTTGGCTTGAAGGATGCTTCAAGTTCAATATTTCCTGGTTTAAGTTTAGTGCAGTGGATGAGCATGCAGCAGAATAACCAGCATTCTTCAGCTGCTCAATCTGGAATGTTTCCGTCCATGTTTTCAGCAAACTCTGTCCATAACAATCTTACCACTGACGATCCATCCAAATTATTAAGCTTTCAAGCCCCAGCCATGTCTACACCGAGTCTACAATATAAAGCAAATCCACAAAACCAAGTCAGTCAGTTGCAGCAGCCACCTGTAACATGGCCCCAACAGCAACAGATGCAGCCATTGTTTCAAAGTCCTATTAACCAGTTGCAGCAGCAAAGACAACAGCAACAGCTACCAAATCCTCAGGAACCAAACATGCAACAGCAACTGCAGTTATCTCAACAGCAGCACCAGCTACATCAACAGCGACAGCAGCAGCCTCCGCAGCAGAAACAATTAGGTCAACAACCTCCTGTAAATAATGTAGTAGTTGCTTCTAACGTCATTTCAAGTCAAAGCATGCAGCAACCTGTACAGTACTCTCAGTTTCAGCAACAACAGTCACCGGCAGGCAGCATCTCAACGCAGCAGGGTGTGCATTCTGCTAGCAAAACTTCATTTCCTTCGACATCCTTGCCTCAAGATTCAGAATTACAGCAACAGGTAGAGCAGTCGCCTACTCTTTTACAGAGGCAGCAGCAACAGACACAGTTGCAGCAGTCCTCCTTACAGTTATTGCAACAAAGTCTATCGCAGAGGGCCCTTCAGCAACTGCAAGTGGCACAACTACCACACCAAAACCTGTCCGAGCAGCAACTGCAGTTGCAGTTACTGCAAAAGCTGCAGCAACAGCAACAGCAACAAGCGCAGTTACTTTCCCCAAGTAGTTCGCTGTTGCAGCCACAGGTGCTCCAACAACAGCTTGCAAATCAACAAAACCAGCAATCACAGCTGGTCCCTTTGTCTCAGCATCAGTCACAACAATTCGTCAGCAATGGTTTCCCAGCCGAAAAACTTCCTAATGGTAACAGCTTCTCATCTTCAGTGCAGATCCAATCACAACAGCTCCCAGTTAGCCAACCTCAAAGTATGCATAAACCACTGGCAATAACAAGAGTTGCTTCTGGACTCACAGATGGTGATGCTCCGTCATGCTCTACGTCACCTTCAACTAATAACTGCCAGGTATCCCCTGCAAACCTCTTGAATAGGAATTTGCAACGGCCACCCTTTTTAGGAGGAAATACTGCAGTCCAGCCCATGAATAACATGGTTCAGGAGCTTCAATCCAGATCTGATGTACGGATCAAACATGAGGCATTTGCAAAAGGTCCAGAGCAAATAAAGTTCAAAGGAGCAGTCACTGATCAATTGGAAGCTTCTTCTGGAACATCACATTGTCTTGATCCTGGTAATATCCCCCAGAGTTTCCCAATGCCAGCCTTCTGTATGGATGGTGATGTCCAGTCTCACCCTCGGATTAATATTCCTGTTGCCACCAATCTTGATGGATTAACACCTGAAACTTTGCTTTCAAGGGGATATGATTCTCAGAAAGACCTGCAAAATTTGCTTTCTAACTATGGTGGGGCTCCAAGGGATACTGAGACAGAGCTGTCTGCTGCTGCTATTAGTTCTCAGTCATTTGGGGTCCCCAATATTCCTTTTAAACCTGGTTGCTCCAATGATGTAGCAATTAATGACACTGGCATAGTGAATAACGGATTGTGGACCAACCAGGCCCAACGCATGAGAACTTTTACGAAGGTGCAAAAACGAGGGTCTGTGGGAAGATGTATTGATGTTACCCGTTACAAGGGATATGATGAACTCCGGCATGATTTAGCTCGCATGTTTGGGATTGAAGGGCAGCTGGAAGATCCACAGAGAACTGACTGGAAGTTAGTCTATGTAGATCATGAAAATGACATACTCCTTGTTGGAGATGACCCTTGGGAAGAGTTCGTGAGTTGTGTGCAGAGCATAAAGATATTGTCATCCGTGGAAGTGCAGCAGATGAGCTTAGATGGAGACCTGGGTAATGTTCCAATTCTCAATCAAGCTTGTAGTGGAACGGATAGTGAAAATGTATGGAGGGCACAGTACGATGATAACTCTGCTGCCTCCTTCAATCGCTAA 3549 0.448 MKAPSNGFLPNSSEGERKTINSELWHACAGSLVSLPPVGSLVVYFPQGHSEQVAASMHKETDFIPSYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDMGLKQTRQPAEFFCKSLTASDTSTHGGFSVPRRAAEKIFPTLDFSMQPPAQELVAKDLHDNTWTFRHIYRGIAASKSPLFLWSSFDSIDILPLMLLVIMTSLFTQLNLLCSNYSHSYQLHVFILLSVFLLNEIDYGATWILGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKAQLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANSSPFSIFYNPRASPSEFVIPLAKYSKALYTQVSLGMRFRMMFETEESGVRRYMGTITGIADLDPVRWKNSQWRNLQVGWDESTAGERPSRVSLWEIEPVVTPFYICPPPFFRPKFPRQPGMPDDESDIENAFKRAMPWMGDDFGLKDASSSIFPGLSLVQWMSMQQNNQHSSAAQSGMFPSMFSANSVHNNLTTDDPSKLLSFQAPAMSTPSLQYKANPQNQVSQLQQPPVTWPQQQQMQPLFQSPINQLQQQRQQQQLPNPQEPNMQQQLQLSQQQHQLHQQRQQQPPQQKQLGQQPPVNNVVVASNVISSQSMQQPVQYSQFQQQQSPAGSISTQQGVHSASKTSFPSTSLPQDSELQQQVEQSPTLLQRQQQQTQLQQSSLQLLQQSLSQRALQQLQVAQLPHQNLSEQQLQLQLLQKLQQQQQQQAQLLSPSSSLLQPQVLQQQLANQQNQQSQLVPLSQHQSQQFVSNGFPAEKLPNGNSFSSSVQIQSQQLPVSQPQSMHKPLAITRVASGLTDGDAPSCSTSPSTNNCQVSPANLLNRNLQRPPFLGGNTAVQPMNNMVQELQSRSDVRIKHEAFAKGPEQIKFKGAVTDQLEASSGTSHCLDPGNIPQSFPMPAFCMDGDVQSHPRINIPVATNLDGLTPETLLSRGYDSQKDLQNLLSNYGGAPRDTETELSAAAISSQSFGVPNIPFKPGCSNDVAINDTGIVNNGLWTNQAQRMRTFTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSVEVQQMSLDGDLGNVPILNQACSGTDSENVWRAQYDDNSAASFNR* 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01509 1182 ProSiteProfiles B3 DNA-binding domain profile. 240 299 IPR003340 GO:0003677
Pte2g01509 1182 SUPERFAMILY DNA-binding pseudobarrel domain 116 184 IPR015300 -
Pte2g01509 1182 MobiDBLite consensus disorder prediction 577 626 - -
Pte2g01509 1182 MobiDBLite consensus disorder prediction 547 566 - -
Pte2g01509 1182 Gene3D - 1050 1144 - -
Pte2g01509 1182 Gene3D - 360 431 - -
Pte2g01509 1182 Pfam AUX/IAA family 1052 1141 IPR033389 -
Pte2g01509 1182 SUPERFAMILY CAD & PB1 domains 1069 1133 - -
Pte2g01509 1182 Gene3D - 124 298 IPR015300 -
Pte2g01509 1182 ProSiteProfiles PB1 domain profile. 1055 1148 IPR000270 GO:0005515
Pte2g01509 1182 SUPERFAMILY DNA-binding pseudobarrel domain 253 326 IPR015300 -
Pte2g01509 1182 FunFam Auxin response factor 360 432 - -
Pte2g01509 1182 MobiDBLite consensus disorder prediction 650 696 - -
Pte2g01509 1182 MobiDBLite consensus disorder prediction 803 822 - -
Pte2g01509 1182 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 1144 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pte2g01509 1182 FunFam Auxin response factor 1050 1144 - -
Pte2g01509 1182 CDD B3_DNA 125 198 IPR003340 GO:0003677
Pte2g01509 1182 Pfam Auxin response factor 323 405 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pte2g01509 1182 Coils Coil 738 758 - -
Pte2g01509 1182 Coils Coil 595 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01509 Pte-Chr2 28884482 28891329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01509 248 557 B3 DNA Binding Superfamily AT1G19220 76.899 7.05e-152 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01509 K14486 - zju:107404980 617.846