Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01506 ATGAAGTTCATTCTTTTTCTTTTCGTTTTCCTACTTCTCACGTGGCTTGATCCCCATTTTGGCGATTCCAATTTGACGGTTGATGTTACAGCAAGCAGTTACTACGTTGCTTCTCAGTACTCTCAGAATCAGGACAGTAAAGCTTGCCAAAATGGATGGGTGACCGGCCCTTATGAAAAGAAGTGTTTGCGTTACATTGAACGATTTCAATCATGGAATGAGTCAGAGATCTCATGTCAACGTTATGGTGGGCATTTAGCAGCTTTGGAGTCACTTGAAGAACTTCGTTGTGCTCATAATCTCTGCAACGGGTACACTAATAGCTGCTGGATTGGAGCAAGGGGCGTGAACTCCACTGCTGGATATAGGTGGGCTTGGTCTGATAATACATCAGTCTGGAATACTTCCATACTTCCTGCAACATTTCTTCAAACAAACTGTATCAACTGCCCCAGAAATGATGGAAGTAATTTATGTATGGTGGTGCTCAGTAATTCAACTACCGTATTAAGTGAGAAATGCAGCACATCACATGCTTCTATCTGCATGATTAATATTATCGGGAACAAGTGTTACCACCTGCACTGCCACAAGGAATATCTTATCATCCTTGCAGTTGTAAGTGCATTAATCCTTTGCACAACACTAGCTGTAGTGGTTTGGCTACTTGCTTTTAGACGAAGCAAGAAGAGAAAGAGGTCCCGTAAACTATCCAATCCAGCAACCTCCACTCTAATTCCGCCATCGTGGAGAGTATTTACCAAAGAGGAAATAAGGTCGATCACAAAGAACTTTAGTGAAGGCAGTCGTCTTCTTGGGGATGCTAAAACCGGTGGGACATACAGTGGGCTTCTACCTGACGGTTCCAAGGTTGCGGTTAAAAGGCTAAAGCGATCTAACTTTCAAAGAAAAAAAGAGTTTTACTCTGAAATTGGTAGAGTTGCTAGGCTTCACCATTCAAATTTGGTGGCTGTTAAAGGGTGCTGCTATGATCATGGTGACCGCTATATTTTATACGAGTTTGTAACTAATGGTCCTTTAGATAAGTGGCTACACCACATACCTAGGGGAGGTCGCAGCTTAGACTGGTCAATGAGAATGAAGATTGCCACAACTCTTGCTCAAGGAATTGCGTTTCTACATGACAAGGTTAAACCACATGTTGTTCATCGTGATATTCGAGCCAGCAACGTACTGTTGGATGAGGAGTTTGGAGCTCACCTTATGGGGGTTGGTCTGTCTAAATTTGTCCCCTACGAAGCTATGCATGAGAGGACTGTCATGGCTGGTGGAACATATGGATATCTCGCTCCAGAATTTGTCTATAGAAATGAGCTGACAACAAAGAGTGATGTCTATAGTTTTGGAGTCTTGCTGCTTGAAATAGTGAGTGGACGTAGGCCTGCACAGGCAGTTGATTCTGTTGGTTGGCAGAGTATATTCGAGTGGGCGACGCCGTTGGTGCAGGCACATCGTTATCCAGAGCTCTTGGATCCTCTTATATCTTCTTCATCTTCATACATTCCAGAGGCCAGTGTCATTCAAAAAGTGGTGGACCTTGTCTATTCATGCACACAACATGTCCCTTCTATGCGCCCTAGGATGTCACATGTGGTTCATCAGCTCCAACAGCTGGCGCAGTCATCCCTAGTGAAGTAG 1659 0.4388 MKFILFLFVFLLLTWLDPHFGDSNLTVDVTASSYYVASQYSQNQDSKACQNGWVTGPYEKKCLRYIERFQSWNESEISCQRYGGHLAALESLEELRCAHNLCNGYTNSCWIGARGVNSTAGYRWAWSDNTSVWNTSILPATFLQTNCINCPRNDGSNLCMVVLSNSTTVLSEKCSTSHASICMINIIGNKCYHLHCHKEYLIILAVVSALILCTTLAVVVWLLAFRRSKKRKRSRKLSNPATSTLIPPSWRVFTKEEIRSITKNFSEGSRLLGDAKTGGTYSGLLPDGSKVAVKRLKRSNFQRKKEFYSEIGRVARLHHSNLVAVKGCCYDHGDRYILYEFVTNGPLDKWLHHIPRGGRSLDWSMRMKIATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPYEAMHERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYPELLDPLISSSSSYIPEASVIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQLAQSSLVK* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01506 552 SMART tyrkin_6 265 542 IPR020635 GO:0004713|GO:0006468
Pte2g01506 552 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 181 545 - -
Pte2g01506 552 ProSiteProfiles Protein kinase domain profile. 266 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01506 552 ProSitePatterns Tyrosine protein kinases specific active-site signature. 388 400 IPR008266 GO:0004672|GO:0006468
Pte2g01506 552 FunFam C-type lectin receptor-like tyrosine-protein kinase 243 341 - -
Pte2g01506 552 Gene3D - 28 186 IPR016186 -
Pte2g01506 552 Gene3D Phosphorylase Kinase; domain 1 225 341 - -
Pte2g01506 552 SMART CLECT_2 49 183 IPR001304 -
Pte2g01506 552 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 342 552 - -
Pte2g01506 552 Pfam Lectin C-type domain 70 183 IPR001304 -
Pte2g01506 552 SUPERFAMILY C-type lectin-like 35 185 IPR016187 -
Pte2g01506 552 CDD CLECT 61 182 - -
Pte2g01506 552 ProSiteProfiles C-type lectin domain profile. 58 183 IPR001304 -
Pte2g01506 552 SUPERFAMILY Protein kinase-like (PK-like) 238 542 IPR011009 -
Pte2g01506 552 Pfam Protein tyrosine and serine/threonine kinase 272 542 IPR001245 GO:0004672|GO:0006468
Pte2g01506 552 Gene3D Transferase(Phosphotransferase) domain 1 342 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01506 Pte-Chr2 28745007 28748744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01506 79 553 Receptor kinase-like Gene Family AT1G52310 69.008 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Pte2g01506 PK_Tyr_Ser-Thr 5.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01506 - - cave:132182905 800.816