Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01486 ATGGCTTTAACTATTCTGAAACTCCTCTCGCTCCTCCTCTATGCAGTCTTCTTCTCAAGTGCATTGGCTTTCAAGTATGATTCTTCCACTTCTGTTAACTCCAATCTAACTATGATACGTTACCTTTGTGAGACCACTCCCTATCCAGCTGTTTGCATGAAGTCACTGAAGCTATGCACCTCAGAAAATTTCAGTCCAGATATCCCCAACTTTCTACTATACTCACTTGAAATTGCAACATCAGAAGTGACGGAGCTTTCTGGTCTGCTCTTCAATGCAGGGCATTCAAACATCATTGAGAATCAAAGAGGAACAGTCCAAGACTGTCAGGAACTTCACCAAATCACAGTTTCATCTTTACAAAGATCTGTTTCCCGGGTTCGCATCGGTGACTCCAGAAAGCAACTGGATGATGCAAGAGCCTACTTGAGTGCAGCACTCACAAACAAGGAGACATGCTTGGCGGGGCTGGACTCTGCTTCTGGTCCTCTGAAGACAGTTTTGCTGAACTCCTTAATTGATGCATACAAGTTTGTGGCTAATTCCCTTTCAATGCTCGCCAGCCCAGGCATGCAAGTAAAAAAAGCCAAGAAGAACAGGCGCCTAATGAGTTTCCCTTCATGGTTTTCAAAGAATAAACGTCGGATACTGCTGAATCCAGATGAAGATTATGATACAAGTGAAGTGCTTACTGTAGCTTCAGATGGAACAGGAAACTTTACAAAGGTCATGGATGCTGTGAATTTTGCGCCAAATTACAGTTTTGACAGGACAATTATCTTTGTCAAACAAGGTGTTTATCAAGAAAATGTGGAAATCCCAAGTTACAAGACAAACATTGTGATGCTTGGAGATGGAAGTGATGTCACTGTTATCAAAGGCAACAGAAGTGTAGCTGGAGGTTGGACCACCTTCAGATCAGCCACTCTAGCTGTGTCTGGGGATGGCTTTCTGGCTCGTGATATCATGATTGAGAACAATGCAGGACCAGAGAAGCATCAAGCTGTGGCATTGAGAGTTAATGCAGATTTAACAGCTTTTTACAGGTGCAACATTAATGGTTATCAGGATACATTGTATGTTCACTCTTTCCGTCAATTCTACCGAGAATGTGACATACACGGAACCGTCGATTACATATTTGGTAATGCAGCTGTGGTTTTACAAGCATGCAATATAATATCAAGGATGCCATTGCCAGGCCAATTCACTGTCATCACTGCACAGTCCAGGGACAACCCTGATGAAAACACAGGAATCTCAATACAAAACTGTTCGATTTTGGCTACTGATGAATTGATTTCTAACTCTAGCAGTGTGAGAAGTTATCTAGGAAGGCCTTGGAGGAATTACTCTCAGACTGTGTTCATTGAGTCTTACATTGATGGTTTCATTGAACCCAAAGGGTGGAAAGAGTGGTCTGATGCTGCTTCAGATACTTTGTACTATGGAGAATATGAGAACTATGGACCTGGTGCTAAGACAAATAATAGAGTCACGTGGACAGGCTATCACATAATGGATTACTATGATGCCTCTAGTTTCTCAGTATCAGAGTTCATCTCTGGTGATGCCTGGCTTGAATCTACTTCCTTCCCTTATGATGATGAAATTTGA 1617 0.4218 MALTILKLLSLLLYAVFFSSALAFKYDSSTSVNSNLTMIRYLCETTPYPAVCMKSLKLCTSENFSPDIPNFLLYSLEIATSEVTELSGLLFNAGHSNIIENQRGTVQDCQELHQITVSSLQRSVSRVRIGDSRKQLDDARAYLSAALTNKETCLAGLDSASGPLKTVLLNSLIDAYKFVANSLSMLASPGMQVKKAKKNRRLMSFPSWFSKNKRRILLNPDEDYDTSEVLTVASDGTGNFTKVMDAVNFAPNYSFDRTIIFVKQGVYQENVEIPSYKTNIVMLGDGSDVTVIKGNRSVAGGWTTFRSATLAVSGDGFLARDIMIENNAGPEKHQAVALRVNADLTAFYRCNINGYQDTLYVHSFRQFYRECDIHGTVDYIFGNAAVVLQACNIISRMPLPGQFTVITAQSRDNPDENTGISIQNCSILATDELISNSSSVRSYLGRPWRNYSQTVFIESYIDGFIEPKGWKEWSDAASDTLYYGEYENYGPGAKTNNRVTWTGYHIMDYYDASSFSVSEFISGDAWLESTSFPYDDEI* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01486 538 SMART PMEI_2 34 185 IPR006501 GO:0004857
Pte2g01486 538 Pfam Pectinesterase 231 524 IPR000070 GO:0030599|GO:0042545
Pte2g01486 538 Pfam Plant invertase/pectin methylesterase inhibitor 39 185 IPR006501 GO:0004857
Pte2g01486 538 NCBIfam pectinesterase inhibitor domain 11 165 IPR006501 GO:0004857
Pte2g01486 538 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 188 IPR035513 -
Pte2g01486 538 FunFam Pectinesterase 224 538 - -
Pte2g01486 538 SUPERFAMILY Pectin lyase-like 227 534 IPR011050 -
Pte2g01486 538 PANTHER PECTINESTERASE 15 528 - -
Pte2g01486 538 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 186 IPR035513 -
Pte2g01486 538 CDD PMEI-like_3 42 187 - -
Pte2g01486 538 ProSitePatterns Pectinesterase signature 1. 254 273 IPR018040 -
Pte2g01486 538 ProSitePatterns Pectinesterase signature 2. 373 382 IPR033131 -
Pte2g01486 538 Gene3D - 224 538 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01486 Pte-Chr2 28451440 28455519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01486 24 539 Carbohydrate Esterase AT2G26440 61.364 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01486 - - qsa:O6P43_021970 770.385