Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01484 ATGGTTTCCAGTGAAGACAGTCAATTAATTCTATCAAGTCTGACACTAGATCAAGTGGGTATATGCGAGGTAGCCCTTGTCTTTACTGTGTTGAGATGGTTCGTTTGTTGGGGTTTTAGACTGTTAAGAAACAGAAGAAGGAACCATGGAATCATTCAGACCACTAGTGCAGCACAGCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTGCTAATAATTGTTCTTGGTTGTCATCCCAGATGACAAGAGAGAGGTATCTCATGCTGACCAGTTTCTGCGATATTAAGGAAAGACTGCCAGACACTTGGGACACGTGTGCTGTGTGCTTGAACCAGTTGATGATGACAGATGAAGTTAGAGAGCTGAGGAACTGTTGTCATGTTTTCCATAAAGAATGCATAGACAGATGGTTGGATCATGATCAAGATAACCACAAACCAACTTGTCCACTATGTAGGGCCCCTCTGTTGGCTTTTCCTCTGCCTTCAGAAAGCTGTTGCTGTATTCCAGCTCCTCAACCCAGTTGGGCAGTGGAAAGACTCATCTATCTCTTTGGTGACGACCTACCACGCTGTTAA 576 0.4514 MVSSEDSQLILSSLTLDQVGICEVALVFTVLRWFVCWGFRLLRNRRRNHGIIQTTSAAQPPPPPPPPPSANNCSWLSSQMTRERYLMLTSFCDIKERLPDTWDTCAVCLNQLMMTDEVRELRNCCHVFHKECIDRWLDHDQDNHKPTCPLCRAPLLAFPLPSESCCCIPAPQPSWAVERLIYLFGDDLPRC* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01484 191 SUPERFAMILY RING/U-box 96 157 - -
Pte2g01484 191 ProSiteProfiles Zinc finger RING-type profile. 105 152 IPR001841 -
Pte2g01484 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 156 IPR013083 -
Pte2g01484 191 SMART ring_2 105 151 IPR001841 -
Pte2g01484 191 PANTHER RING ZINC FINGER PROTEIN-RELATED 28 187 - -
Pte2g01484 191 Pfam Ring finger domain 103 152 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01484 Pte-Chr2 28428609 28430935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01484 5 188 C3H Transcription Factor Family AT5G20885 43.655 2.32e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01484 K16281 - qsa:O6P43_021965 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01484 2 28428609 28430935 Pte2g01484 2 28428609 28430935 RCT