Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01475 ATGATGGTACAATCAAAGAAGTTCAGAGGAGTCAGGCAACGCCAGTGGGGCTCCTGGGTGTCAGAGATTCGCCACCCTTTGCTGAAGAGAAGGGTATGGCTAGGGACATTTGAAACGGCAGAGGCTGCAGCAAGGGCATATGACCAAGCATCCATTTTGATGAATGGTCAAAATGCCAAGACCAATTTCCCAAACTCAAAGAATCACAATGAAAATGCGAAATCTAGTGAAGGCACTTCTTCCTTGTCCAACAAGGCTTTCTCGGAGGTGCTTAGCACAAAGCTCAGGAGGTGTTGCAAAGATCCCTCTCCTTCCCTCACTTGTCTCAGGCTGGATGCTGACAATGCCAACATTGGTGTGTGGCAAAAGCGTGCTGGACCACATTCAGGCTCCAATTGGGTCATGAGGGTGGAGCTTGGGAAGAAGAAGATTCAAGGGTTTGATGGTAAAGAGTCTCATTCTTCTGCAGGCACCCCAAAGTTTCGCAGTGATCAGGCTGGCAATGAAATTGATGAAGAGGATAGGATTGCAATGCAGATGATTGAGGAACTGCTTAATTGGAACCATCCTTCAAGCAATATTGCTGATCAGGGAGATGCTAGAATTCTTCCTTGCTTTGGTCCTTGA 627 0.4721 MMVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQASILMNGQNAKTNFPNSKNHNENAKSSEGTSSLSNKAFSEVLSTKLRRCCKDPSPSLTCLRLDADNANIGVWQKRAGPHSGSNWVMRVELGKKKIQGFDGKESHSSAGTPKFRSDQAGNEIDEEDRIAMQMIEELLNWNHPSSNIADQGDARILPCFGP* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01475 208 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Pte2g01475 208 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Pte2g01475 208 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Pte2g01475 208 MobiDBLite consensus disorder prediction 58 82 - -
Pte2g01475 208 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Pte2g01475 208 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Pte2g01475 208 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Pte2g01475 208 MobiDBLite consensus disorder prediction 146 168 - -
Pte2g01475 208 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Pte2g01475 208 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Pte2g01475 208 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Pte2g01475 208 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01475 Pte-Chr2 27607648 27609036 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01475 2 192 AP2-EREBP Transcription Factor Family AT5G25390 61.458 1.20e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte2g01475 AP2 7.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01475 - - qsu:111994332 288.115