Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01463 ATGACGCTCCTCAATGGATGGGCAAACCCAAATGCATTAGATGAGGAGGATGAAGGAGCGCCCATTCAATTACTCATCGCTGTTACGTCCATTATGTACATTACTATTTTTCCTGGAGATGCAGTGATCAGCCAAGTTTGGGAATATGATGCTCATGCTACCTTTTATGGTGACATGAAGGGTAACGAGACAATGCATGGAGCTTGCGGTTATGAAGATTTGTTCAAGCAAGGCTATGGACTTGAAACAGCAGCATTAAGCACTGCTCTTTTTAAAAACGGATCGATGTGCGGTGCTTGTTTTGAAATAATGTGTGTGCACTCGAAGTGGTGCTCCAATCCATGTTACAACCACCAATTTCTGTCCTCCAAACTATACCAAAACACATGA 390 0.4282 MTLLNGWANPNALDEEDEGAPIQLLIAVTSIMYITIFPGDAVISQVWEYDAHATFYGDMKGNETMHGACGYEDLFKQGYGLETAALSTALFKNGSMCGACFEIMCVHSKWCSNPCYNHQFLSSKLYQNT* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01463 129 PANTHER EXPANSIN-A15 42 113 IPR002963 GO:0009664
Pte2g01463 129 Gene3D - 40 123 IPR036908 -
Pte2g01463 129 PRINTS Expansin/Lol pI family signature 87 105 IPR007118 GO:0005576
Pte2g01463 129 PRINTS Expansin/Lol pI family signature 47 62 IPR007118 GO:0005576
Pte2g01463 129 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Pte2g01463 129 SUPERFAMILY Barwin-like endoglucanases 41 111 IPR036908 -
Pte2g01463 129 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 66 113 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01463 Pte-Chr2 26472566 26474393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01463 49 111 Expansin Gene Family AT5G39300 75.000 2.08e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01463 - - cave:132182153 118.627