Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01462 ATGTCTGGCACTTGCATCACGGCGGAATTTGCCGGCTCCGGCGAATTCATGCTGTTTGGTGTTAGAGTCGTGGTTGATTCCATGAGGAAAAGCGTCAGCATGAACAATCTCTCTCAGTACGAGCATCCCCAAGATGTCTCTGGTAATGCCACTCTGATTGAGGACGCGGTCGCGGCCGGTTATGCTTCCGCCGATGAACCCGTCCATCACAATTCTGGCAGAAATCGTGAGCGCAAACGAGGAATCCCGTGGACGGAGGAGGAACACAAGCTGTTCTTGCTTGGTTTACAGAAAGTCGGGAAAGGAGATTGGAGAGGGATCTCTAAGAACTTTGTCAAGACAAGGACGCCAACCCAGGTGGCAAGCCACGCTCAGAAATACTTTCTACGCCGAAGCAACCTCAGCCGCCGTCGCCGCAGATCCAGCCTCTTCGATATCACCACCGATTCGGTCACTGCTATGCCTATGGAGGAAAACCAAGTGCAGCATATGGATAATGTTTGTCAGTCACGTCATTTGCAGACAATGAATCCTGGAACGATCAACATGGGTAGATTTTCATTAATACCCAACTCCTACAGCCGTTGCTGGTAA 594 0.5084 MSGTCITAEFAGSGEFMLFGVRVVVDSMRKSVSMNNLSQYEHPQDVSGNATLIEDAVAAGYASADEPVHHNSGRNRERKRGIPWTEEEHKLFLLGLQKVGKGDWRGISKNFVKTRTPTQVASHAQKYFLRRSNLSRRRRRSSLFDITTDSVTAMPMEENQVQHMDNVCQSRHLQTMNPGTINMGRFSLIPNSYSRCW* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01462 197 ProSiteProfiles SANT domain profile. 84 132 IPR017884 -
Pte2g01462 197 SMART sant 80 130 IPR001005 -
Pte2g01462 197 CDD SANT 83 128 IPR001005 -
Pte2g01462 197 SUPERFAMILY Homeodomain-like 78 133 IPR009057 -
Pte2g01462 197 Gene3D - 82 134 - -
Pte2g01462 197 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 132 IPR017930 -
Pte2g01462 197 FunFam transcription factor MYB1R1 82 133 - -
Pte2g01462 197 ProSiteProfiles Myb-like domain profile. 76 128 IPR001005 -
Pte2g01462 197 NCBIfam myb-like DNA-binding domain, SHAQKYF class 79 130 IPR006447 GO:0003677
Pte2g01462 197 Pfam Myb-like DNA-binding domain 83 128 IPR001005 -
Pte2g01462 197 PANTHER TRANSCRIPTION FACTOR KUA1 7 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01462 Pte-Chr2 26463817 26466468 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte2g01462 Myb_DNA-binding 1.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01462 - - qsa:O6P43_030925 256.529