Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01460 ATGTCTGGCACTTGCATCACGGCGGAATTTGCCGGCTCCGGCGAATTCATGCTGTTTGGTGTTAGAGTCGTGGTTGATTCCATGAGGAAAAGCGTCAGCATGAACAATCTCTCTCAGTACGAGCATCCCCAAGATGTCTCTGGTAATGCCACTCTGATTGAGGACGCGGTCGCGGCCGGTTATGCTTCCGCCGATGAACCCGTCCATCACAATTCTGGCAGAAATCGTGAGCGCAAACGAGGAATCCCGTGGACGGAGGAGGAGCACAAGCTGTTCTTGCTTGGTTTACAGAAAGTCGGGAAAGGAGATTGGAGAGGGATCTCTAAGAACTTTGTCAAGACAAGGACGCCAACCCAGGTGGCAAGCCACGCTCAGAAATACTTTCTACGCCGAAGCAACCTCAGCCGCCGTCGCCGCAGATCCAGCCTCTTCGATATCACCACCGATTCGGTCACTGCTATGCCTATGGAGGAAAACCAAGTGCAGCATCTGGATAATGTTTGTCAGTCACGTCATTTGCAGACAATCAATCCTGGAACGATCAACATGGGTGGATTTTCATTAATACCAACTCCTACAGCCGTTGCTGGTAATGTTCCTGTCCCAGTTGAGAATCCGATGGGAAATCTTTCACTGTCCCAAGAAAATTTGAGTCCTAATGATTCAATCAAGTTGGTCAGAGCTGTTCCTGTTCCTCAAAATGCCAAGGCTTCAGTGGTATTGGTAGCTGAAGGTAGCTTGGATATGAACTCGGCATTTGATTCAGAGTCTCTATCTCTCAAGTTGTCTCTAACATCTGAGCCAAGAGCCACCCCGTCAAGGGACTTTGCCTTCCAGGCAATGCCCTGCTTCAAAAATAGAGATAGCACTATCAGTGTAGCTTGA 885 0.4915 MSGTCITAEFAGSGEFMLFGVRVVVDSMRKSVSMNNLSQYEHPQDVSGNATLIEDAVAAGYASADEPVHHNSGRNRERKRGIPWTEEEHKLFLLGLQKVGKGDWRGISKNFVKTRTPTQVASHAQKYFLRRSNLSRRRRRSSLFDITTDSVTAMPMEENQVQHLDNVCQSRHLQTINPGTINMGGFSLIPTPTAVAGNVPVPVENPMGNLSLSQENLSPNDSIKLVRAVPVPQNAKASVVLVAEGSLDMNSAFDSESLSLKLSLTSEPRATPSRDFAFQAMPCFKNRDSTISVA* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01460 294 ProSiteProfiles SANT domain profile. 84 132 IPR017884 -
Pte2g01460 294 SMART sant 80 130 IPR001005 -
Pte2g01460 294 CDD SANT 83 128 IPR001005 -
Pte2g01460 294 PANTHER TRANSCRIPTION FACTOR KUA1 7 211 - -
Pte2g01460 294 NCBIfam myb-like DNA-binding domain, SHAQKYF class 79 130 IPR006447 GO:0003677
Pte2g01460 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 132 IPR017930 -
Pte2g01460 294 ProSiteProfiles Myb-like domain profile. 76 128 IPR001005 -
Pte2g01460 294 FunFam transcription factor MYB1R1 82 133 - -
Pte2g01460 294 Pfam Myb-like DNA-binding domain 83 128 IPR001005 -
Pte2g01460 294 Gene3D - 82 134 - -
Pte2g01460 294 SUPERFAMILY Homeodomain-like 78 132 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01460 Pte-Chr2 26441344 26443995 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte2g01460 Myb_DNA-binding 2.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01460 - - qsa:O6P43_022770 331.257