Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01458 ATGGATCCTCCACTCATCAACAATTCCTCATTCTCTGCAGCGAACCCCTCTGCTTACAGCTTAGCTGAGATTTGGCCTTTGAGTGGGGAAACCGCTTCCGGTGTGCTAGGCCTCCAAATGAACAACTTGTGTCACAGCTTGACTGCATTTGCCGAGACTTCTGTTCATCGAGATGGGTCGGTCGAGGAATCCACCGTCACTGAGCTGAGCGCAGGCGGAGGTGTTGCCAGTGATGGTGGTACTCGTTGTGGAAGCAAGAGGAAAGACGTGAGCTCGGAGAATGAGTCCTCGAAGAGGGTCTCCGCTAGCAGTGCGAATGATCCAAACATTAAACGGATAAAATTAATAGGATCCGCTGATGAAAATAGTGGTTCGAAATCTGAACTGGAGACAAGTACAGCAGCTGCTAATAGATCAACCAAACAAAGCACCAAGCCATCGGAGCCACCTAAGCAAGATTACGTACACGTGAGAGCAAGAAGAGGCCAAGCCACTGATAGCCACAGTCTAGCAGAGAGAGCAAGGAGAGAAAAAATAAGTGAAAGAATGAAAGTACTTCAAGATTTAGTCCCTGGATGCAACAAGATTATCGGTAAAGCACTTGTCCTTGATGAGATTATTAACTACATCCAGTCACTGGAACGTCAGGTTGAGTTTCTATCGATGAAGCTTGAAGCAGTCAGTTCAAGAATAAACATAACCTATGCGATTGAAGGCTTTCCTTCAAAAGATCTTGCATCACCATCATTTGATGCTTCTGGGATGATAGTCTCATCGCAAGCACTGAGGGGCTATGTTGAGGGGCCACAACCGGAATGGCTACATATGCAATTGGCCGGTAGTTTTGAGAAAGCAACATAG 861 0.4657 MDPPLINNSSFSAANPSAYSLAEIWPLSGETASGVLGLQMNNLCHSLTAFAETSVHRDGSVEESTVTELSAGGGVASDGGTRCGSKRKDVSSENESSKRVSASSANDPNIKRIKLIGSADENSGSKSELETSTAAANRSTKQSTKPSEPPKQDYVHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKIIGKALVLDEIINYIQSLERQVEFLSMKLEAVSSRINITYAIEGFPSKDLASPSFDASGMIVSSQALRGYVEGPQPEWLHMQLAGSFEKAT* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01458 286 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 74 255 IPR024097 GO:0006355
Pte2g01458 286 SMART finulus 169 219 IPR011598 GO:0046983
Pte2g01458 286 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 213 IPR011598 GO:0046983
Pte2g01458 286 Coils Coil 203 230 - -
Pte2g01458 286 Gene3D - 160 235 IPR036638 GO:0046983
Pte2g01458 286 MobiDBLite consensus disorder prediction 151 175 - -
Pte2g01458 286 FunFam Basic helix-loop-helix transcription factor 160 232 - -
Pte2g01458 286 MobiDBLite consensus disorder prediction 55 175 - -
Pte2g01458 286 Pfam Helix-loop-helix DNA-binding domain 167 214 IPR011598 GO:0046983
Pte2g01458 286 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 232 IPR036638 GO:0046983
Pte2g01458 286 MobiDBLite consensus disorder prediction 120 149 - -
Pte2g01458 286 CDD bHLH_AtBPE_like 153 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01458 Pte-Chr2 26415779 26419048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01458 1 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 51.186 2.05e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte2g01458 HLH 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01458 - - zju:107418528 393.275