Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01451 ATGGGGCATAAGAAGCGAAATCTTGCTCCGCGAAGCAAACAGTCTCCTCCGGCTGCTGGCCCTCAATCTACCGGAGACGGATTCGCCGATGTCGCTGCTCCTACTTTGGCGGAGTCCGACCTAAGGTTGATTGCGAATGCTTTTCCCAACCAAGTTAAGATCGAGCCGGATTTTCTATGGTCGGATGGTTCGGCTTACTCTACGATCAAGCTAGAATGTGAGCGAGCCCTAAATGCCCTTCGGCGTGGGAATCATACCAAGGCTTTGAGGTTAATGAAGGAGTCCTGTGCGAAGCATGAGAGTTCCGCTCACTCGGCCTTAATCTACCGTGTCCACGGTACTGTGTGTGTGAAGGTCGCGCAGATTATCGATGACCCTATTGCAAAGCAAAGACATCTGAGGAATGCCATTGAGTCGGTGAGGAAGGCAGTGGAATTGTCACCCAATTCGGTTGAGTTCGCGCATTTCTATGCTAATCTATTGTATGAGGCTGCCAATGACGCGAAGGAGTACGAGGAGGTGGTGCAGGAGTGTGAGAGGGCATTGTCAATTGAAAATCCGATTGATCCTGCTAAAGAGAGCTTGCAAGAAGAGAGTCAACAGAAGATATTAAGTGCCGAGGCCCGAATAGCTCATGTGCAGAATGAGCTGAGGCAGTTAATTCAGAAGTCTAATATTGCTTCTCTATCGACTTGGATGAAGAATTTGGGCAATGGGGAGGAGAAGTTTCGATTAATTCCAATAAGGAGGCCCACTGAGGATCCAATGGAAGTGAGATTATTACAAACTAGAAGACCAAATGAAATTAAGAAAGCAACTAAGACGCCAGAAGAACGGAGGAAAGAGATTGAAGTTCGAGTGGCTGCTGCGAGGTTGTTGCAGCAGAAGTCAGAGTCAAATCAACCTCAAAATGAGGGAGGGAGTACTGATAGGGGGACGGATTCATCTTCTGGCTCTGGTCAGAGAGTTGGTGACAGAAGGAGGTATGGAATGCGAAAAAATGGGTCCAATTTAGAAAGGAAAGATTGGGTATGGTCGTATTGGAATTCTATGAGTGTCGATATGAAGAAGGATTTGACTGGGGTGAGGGTTGCTGACCTTAAATCCCATTTTGGATCTTCTAAGGATACTTTTGCAAGTGAGGTTTTGTCAGAAGCGTTATCTTTTGCAGAGGCTAATAAAACGTGGAAATTCTGGGCTTGCTGTAGATGTAATCAGAAACATTCTGATAAGGAATCTCACGTGCATCATGTTATACAAGAACACATCGGAATGCTCTTGCCTAAGATGCAGAGGCTTGTACCTCAAAATATTGAAAATGAATGTGTTGAGATTCTGCTGAATCATTCTTTTAAGCCTCTCAATTTACCAGCAGCTATTAAAATGGTGGAAAATCAAGAGAAGAGAAAGGGATTTAAGTTTTCTGAAGATTCATATCCAGATCAACATAACAAGGAGTGTCGTGATTGCTTTAGAGATGCCTGGGATTCTCATCCTGAGAAAGGAAGCATGGGGCAGATTTCTGATAATTGTGCTATGCAGATTAATGAATACATTGAAATTCATGAGAGTGACTGTAGGGAGTGTCCCGAGGACCAATCATCCTTGGCAAATTTATTTGACAATGGCTGGCTAGTTTCTGATGATTCTGAGCGAGCAAAGCTTCTTGAGAAAATTCAGGGGACGTTTGAGGTGCTTATTCGACACAAAGTTTTTGCAGCTAGCCACCTTCACAAGGTTATACAACTGGCAATGGATGAGCTACAGACTCATCCTTCTGCTGCTCAGCTTCTAAATCACGATCTTGATCAATCACCTATGTGTATCTGTTTTCTGGAAGCTGAGCAACTTAAAAAAATTCACCAGTATCTACAGGAACTATCTCATGCTTGTGGTTTGGGTAGGTATTCTGAGAAAGGTAGCAGTCCCACAGAGGATTTAAACCTTACAAATCAAGGACCAGAAATCATGGAGAAGATTGTTCTCAGTGAAGATGCGTTGTTCCTTCTTTTAGATGAGGGCTTACCGTTAATAGGTTCTGGCATAGCTCAAGGAACTACTGCTAGTGAAGTTACTTCTGCAACTTCCTCCTTCAGAGGTTCATCTGGTTCTGATGCTATGTTATCCTGGATTTTTGTGGGTTCTTCTAGTGATGAACAATTGGCTTCATGGATGCGTGCAAAAGAAGATAAAATACATCGGGGAGTAGAAATTCTGCAGATGCTTGAGAAGGAATTTTATCACCTGCAAAGCCTTTGTGAGAAGAAATGTGAGCGAGTGAACTATGGGGAAGGATTACAGGCAGTAGAGGATCTATGTCTTGAAGAAGGTAAGAGAAGGGAAATGGTAACTGAATTTGCACATCGAAGTTTTGAGTCTGTCTTGAGAAAGAGAAGAGAAGAGCTCATTGAGAGTGAGAACGACATGTTGTATGTCCGCACTAGATTTGAGTTGGATGCTATATCGAATGTTTTACAAGAAGCTGAAGCCATGAACGTCAATCAATTTGGTTATGAGGAAGCTAATAGTGGTACGACCTCTCAGTTTTGTGACCTGGAATCTGGAGGAGGAGAAGATTGGAGAGCCAAAGATTATATGCATCAAATGGATATTAGTATCGGCACAGCAATTCAGAAACAGAAAGAGCACCTTTCTTTGGAGCTCTGCAAAATTGATGCACGAATACTGCGGAATATGAATGGGATGAAGCACTTGGAGCTGAAGCTTGAGCAAGTGTCCGCTTATGATTATCAGACAGTAATACTGCCTCTGTTGAAATCATTCTTGAGGACACGATTGGAGGATCTGGCTGAGAAAGATGCCACTCAAAAGTCGGATGCTGCTAGAGAAGCATTTTTAGTTGAACTTGCTCTTGACTCGAAGAAAGTTCTGAGAGGAGGAAATGGTAATCCAAGGCACATGCAGGAGAAATCAAAGGATAAGAAAAAGAATAGGGATCAGAAGAAAATAAGAGATTCAAAGGTGATAATAATCCATTCTGTATTTGAAGGACCAAATCTTTGCTCTGACAGCTTTCTAATGATTTCTCTCAGTTCACATCCAGCAGTGCCTACTGCCGAATGTCCAGATTCTACAACTAGTCAATTGGAAGAACTGGATGAAGAAAATAGAAGAAAAATTGAGCTAGAAGAGGAAGAAAAAAAGCTTGAAGAAACTTTGGAATTGCAAAGACGTATAGAAAATGAGGCCAAACAGAAGCACCTTGCCGAGCAACACAAGAAGTTCTCTCAAACACATTCAGATAATGGAGCAAATCTTCATGACGCTCTCTCTAGGCCTTCAGCTGATTGCTTGGAAGTCTGTGAGCCGTTAAAACCTTCTATAATGGTTGAGCAGCTGGTGGAGAATGGTTTCTCATACATTCAAGAACATGTTAATAACAACATCGCAAATGGCTCCACAATGTCAATGAAATGTGCTGTAGATTCAGTTAGTGAGAACATTCACCATACCAATTATTCAAGAGTTAAACAGGGCATGCCTAATGGAGGTGTTCAAGATGCTGGTCTTCTACTGGCTGATAGACGATCAGGTAAACGTAGTAGACGCCATAAGAGTACTTCCAAGTTGGTTGATGAAAAGTTCGAATTGGTTCCACCTGGAAATAAGAACAGTCTTTGCCAAAGAACACATGTTGATGGTCATCTACAAGAACAAGTTGTTGAAGAAAATGGAATGAAGACCTTGAGAGAATTGCAAGTGGAAGATGATGATGAGGAAAGGTTCCAAGCTGACATAAAAAGAGCTGTACGGCAAAGCCTTGACACATATCAAGCACACCAGAAGTTGCCATTGGTTACACGTCCACAAACACATCCAAGAACATCTGGAGAAGCAGGTGAAGTTGGTCTTTCTACAGAGCAAGACAAAGGGGAGGTTACAAATGAGGAAGATGTTTTAGGTATGGGGCTGAAGAATGAAGTAGGTGAATACAATTGTTTCCTTAATGTTATCATACAGTCTCTGTGGCATCTTCGACAATTCCGAAATGAGTTTCTTAGAAGATCAACAGCACAGCATGTTCATGTGGGGGATCCTTGTGTTGTCTGTGCCTTGTATGAAATATTTGCTGCTATGAGCAATGCATCCAAGGAATTGCGAAGAGAAGCAATTGCACCCACATCCCTGAGGATAGCTCTCAGCAACCTGTATCCAGATAGCAACTTCTTCCAAGAGGCCCAGATGAATGATGCTTCTGAAGTATTGGCTGTGATATTTGACTGCCTCCATCAGTCATTTACTTGTGGTTCAAGTATTTCAGATACAGACTCAATAGAAAGTACTTGCACAGGATCCTGGGATTGTTCAAGTGACAGTTGCATAGTTCATTCTCTATTTGGAATGAACATTTATGAACGAATGAATTGTTACCATTGTAGTCTGGAGTCCAGGCACCTGAAGTACACTTCTTTCTTCCACAACATAAATGCGAGTGCTCTCAGAACCATGAAGGTTATGTGTGCTGACAACAACTTTGACGAGCTTCTAAATCTTGTAGAGATGAATCATCAATTAGCTTGTGATCCAGAGTCTGGTGGCTGTGGCACACTCAACTACATACATCACTTCCTTTCAAAACCACCTCGTGTCTTCACAACAGTTCTCGGTTGGCAGAATACATGTGAAAGTACTGAAGACATAACAGCAACACTAGCAGCCTTGAGCACAAAGATAGACATCAGCATTCTATACCGTGGTTTGGATCCAAAAAGCACTCACAATTTGGTTTCAGTGGTTTGCTATTATGGTCAACACTATCACTGCTTTGCCTACAGCCATGATAATGAAAGATGGGTCATGTATGATGATAAGACGGTCAGAGTAATTGGTGGGTGGGCTGAAGTTCTGACAATGTGCGAGAAAGGTCATCTGCAGCCCCAAGTTCTCTTCTTCGAGTCTGCAGAGTAG 4929 0.4254 MGHKKRNLAPRSKQSPPAAGPQSTGDGFADVAAPTLAESDLRLIANAFPNQVKIEPDFLWSDGSAYSTIKLECERALNALRRGNHTKALRLMKESCAKHESSAHSALIYRVHGTVCVKVAQIIDDPIAKQRHLRNAIESVRKAVELSPNSVEFAHFYANLLYEAANDAKEYEEVVQECERALSIENPIDPAKESLQEESQQKILSAEARIAHVQNELRQLIQKSNIASLSTWMKNLGNGEEKFRLIPIRRPTEDPMEVRLLQTRRPNEIKKATKTPEERRKEIEVRVAAARLLQQKSESNQPQNEGGSTDRGTDSSSGSGQRVGDRRRYGMRKNGSNLERKDWVWSYWNSMSVDMKKDLTGVRVADLKSHFGSSKDTFASEVLSEALSFAEANKTWKFWACCRCNQKHSDKESHVHHVIQEHIGMLLPKMQRLVPQNIENECVEILLNHSFKPLNLPAAIKMVENQEKRKGFKFSEDSYPDQHNKECRDCFRDAWDSHPEKGSMGQISDNCAMQINEYIEIHESDCRECPEDQSSLANLFDNGWLVSDDSERAKLLEKIQGTFEVLIRHKVFAASHLHKVIQLAMDELQTHPSAAQLLNHDLDQSPMCICFLEAEQLKKIHQYLQELSHACGLGRYSEKGSSPTEDLNLTNQGPEIMEKIVLSEDALFLLLDEGLPLIGSGIAQGTTASEVTSATSSFRGSSGSDAMLSWIFVGSSSDEQLASWMRAKEDKIHRGVEILQMLEKEFYHLQSLCEKKCERVNYGEGLQAVEDLCLEEGKRREMVTEFAHRSFESVLRKRREELIESENDMLYVRTRFELDAISNVLQEAEAMNVNQFGYEEANSGTTSQFCDLESGGGEDWRAKDYMHQMDISIGTAIQKQKEHLSLELCKIDARILRNMNGMKHLELKLEQVSAYDYQTVILPLLKSFLRTRLEDLAEKDATQKSDAAREAFLVELALDSKKVLRGGNGNPRHMQEKSKDKKKNRDQKKIRDSKVIIIHSVFEGPNLCSDSFLMISLSSHPAVPTAECPDSTTSQLEELDEENRRKIELEEEEKKLEETLELQRRIENEAKQKHLAEQHKKFSQTHSDNGANLHDALSRPSADCLEVCEPLKPSIMVEQLVENGFSYIQEHVNNNIANGSTMSMKCAVDSVSENIHHTNYSRVKQGMPNGGVQDAGLLLADRRSGKRSRRHKSTSKLVDEKFELVPPGNKNSLCQRTHVDGHLQEQVVEENGMKTLRELQVEDDDEERFQADIKRAVRQSLDTYQAHQKLPLVTRPQTHPRTSGEAGEVGLSTEQDKGEVTNEEDVLGMGLKNEVGEYNCFLNVIIQSLWHLRQFRNEFLRRSTAQHVHVGDPCVVCALYEIFAAMSNASKELRREAIAPTSLRIALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHQSFTCGSSISDTDSIESTCTGSWDCSSDSCIVHSLFGMNIYERMNCYHCSLESRHLKYTSFFHNINASALRTMKVMCADNNFDELLNLVEMNHQLACDPESGGCGTLNYIHHFLSKPPRVFTTVLGWQNTCESTEDITATLAALSTKIDISILYRGLDPKSTHNLVSVVCYYGQHYHCFAYSHDNERWVMYDDKTVRVIGGWAEVLTMCEKGHLQPQVLFFESAE* 1643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01451 1642 MobiDBLite consensus disorder prediction 293 333 - -
Pte2g01451 1642 Coils Coil 1032 1073 - -
Pte2g01451 1642 MobiDBLite consensus disorder prediction 262 281 - -
Pte2g01451 1642 CDD Peptidase_C19 1400 1639 - -
Pte2g01451 1642 MobiDBLite consensus disorder prediction 1 29 - -
Pte2g01451 1642 Pfam Protein of unknown function (DUF627) 75 186 IPR006866 -
Pte2g01451 1642 Gene3D Tetratricopeptide repeat domain 46 224 IPR011990 GO:0005515
Pte2g01451 1642 MobiDBLite consensus disorder prediction 293 322 - -
Pte2g01451 1642 SUPERFAMILY Cysteine proteinases 1309 1639 IPR038765 -
Pte2g01451 1642 MobiDBLite consensus disorder prediction 1275 1302 - -
Pte2g01451 1642 Coils Coil 196 223 - -
Pte2g01451 1642 MobiDBLite consensus disorder prediction 963 989 - -
Pte2g01451 1642 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1309 1641 IPR028889 -
Pte2g01451 1642 Pfam Protein of unknown function (DUF629) 345 873 IPR006865 -
Pte2g01451 1642 Coils Coil 161 181 - -
Pte2g01451 1642 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1640 - -
Pte2g01451 1642 Pfam Ubiquitin carboxyl-terminal hydrolase 1318 1624 IPR001394 GO:0004843|GO:0016579
Pte2g01451 1642 Gene3D Cysteine proteinases 1290 1640 - -
Pte2g01451 1642 MobiDBLite consensus disorder prediction 972 989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01451 Pte-Chr2 26326388 26334483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01451 1 1639 C2H2 Transcription Factor Family AT3G47910 55.676 0.0 1688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01451 - - qsa:O6P43_022788 2130.14