Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01450 ATGGGTATGGATTACTATAACATTCTGAAAGTGAATCGGCATGCTAATGAAGACGATTTGAAGAAGGCCTACAAAAGGCTTGCAATGATATGGCACCCAGATAAAAACCCAGTCAACAAAAGCGAAGCTGAAGCTAAATTTAAGCAAATTTGCGAAGCTTACGATGTATTAAGCGACCCTCAGAAGCGTCAGATCTATGATCTTTATGGTGAGGAAGGACTCAAGTCTGGTCAGTTCCCGCCAACACAACAGCAATCCTCCTCTTCTGCCTCGTCGTCTAGGCCTCGCAATCCATTTTCCCAGAACCATCAAAGACAACATCCGACGTCGTTTCGGTTCAATCCACGGGACGCAGACGACATTTACGCGGAGTTCTTTGGCTCTGAAAGTGGTGGAGCTGGTACTAGTGGAGCCAGCGGGAAACCTAATGCATACAAAGATGGGTTTTTTAAGACTTCTAATGGCTCGGGGTTCGGTGGTGCGCCGAGGAAGGCTGTGGCAGTAGAGAATTCTTTGCCTTGTAGCTTGGAAGAGCTGTATCAAGGTGCCAGGAAGAAGATGAAGATATATAGAAATGTATACGATACCTCTGGTAACTGTCGTACCGTGGAGGAAATATTGACGATTGAGATAAAACCTGGGTGGAAGAAAGGAACGAAGATTACTTTCCCTGATAAGGGTAACCAGGAGCCTGGTGTCATTCCTGCTGATCTTATCTTTGTAGTAGATGAGAAACCACATGCCGTTTTTAAGAGAAATGGTAATGATTTGGTCGTCAACCAGGAGATAACACTTCTGGAGGCGCTTACTGGCAGAACACTAGATATCACAACCTTGGATGGCAGGAGTGTTATGATCCCATTGACAAATATTGTCAAGCCTGGTTCTGAGGTAGTGGTTCCCAATGAAGGAATGCCTATTTCTAAAGAACCTGGGAAGAAGGGAAACTTAAGAGTCAAACTTGACGTCAAGTATCCCTTAGAACTTACTGCAGAACAGAAATCTGATCTGAAGAGAGTACTGGGTGGAGTCCGGTGGGTTTCTCCGAGTGGATAA 1056 0.4508 MGMDYYNILKVNRHANEDDLKKAYKRLAMIWHPDKNPVNKSEAEAKFKQICEAYDVLSDPQKRQIYDLYGEEGLKSGQFPPTQQQSSSSASSSRPRNPFSQNHQRQHPTSFRFNPRDADDIYAEFFGSESGGAGTSGASGKPNAYKDGFFKTSNGSGFGGAPRKAVAVENSLPCSLEELYQGARKKMKIYRNVYDTSGNCRTVEEILTIEIKPGWKKGTKITFPDKGNQEPGVIPADLIFVVDEKPHAVFKRNGNDLVVNQEITLLEALTGRTLDITTLDGRSVMIPLTNIVKPGSEVVVPNEGMPISKEPGKKGNLRVKLDVKYPLELTAEQKSDLKRVLGGVRWVSPSG* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01450 351 CDD DnaJ_C 172 326 - -
Pte2g01450 351 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 3 341 - -
Pte2g01450 351 CDD DnaJ 4 59 IPR001623 -
Pte2g01450 351 FunFam DnaJ subfamily B member 13 3 136 - -
Pte2g01450 351 Gene3D - 247 326 - -
Pte2g01450 351 Pfam DnaJ domain 4 67 IPR001623 -
Pte2g01450 351 SMART dnaj_3 3 62 IPR001623 -
Pte2g01450 351 FunFam DnaJ subfamily B member 13 247 327 - -
Pte2g01450 351 Gene3D - 166 245 - -
Pte2g01450 351 PRINTS DnaJ domain signature 42 62 IPR001623 -
Pte2g01450 351 PRINTS DnaJ domain signature 6 24 IPR001623 -
Pte2g01450 351 PRINTS DnaJ domain signature 62 81 IPR001623 -
Pte2g01450 351 PRINTS DnaJ domain signature 24 39 IPR001623 -
Pte2g01450 351 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Pte2g01450 351 SUPERFAMILY Chaperone J-domain 3 83 IPR036869 -
Pte2g01450 351 SUPERFAMILY HSP40/DnaJ peptide-binding domain 249 335 IPR008971 GO:0006457|GO:0051082
Pte2g01450 351 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Pte2g01450 351 MobiDBLite consensus disorder prediction 77 109 - -
Pte2g01450 351 MobiDBLite consensus disorder prediction 73 115 - -
Pte2g01450 351 FunFam Dnaj homolog subfamily b member 164 245 - -
Pte2g01450 351 Pfam DnaJ C terminal domain 169 326 IPR002939 -
Pte2g01450 351 SUPERFAMILY HSP40/DnaJ peptide-binding domain 170 247 IPR008971 GO:0006457|GO:0051082
Pte2g01450 351 Gene3D DnaJ domain 2 138 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01450 Pte-Chr2 26309724 26313321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01450 5 69 C2H2 Transcription Factor Family AT1G74250 36.232 1.11e-09 57.8