Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01444 ATGGTCCCTAGTATAAGAGACCTGCAGTTATCGTCGTTAACGTCTGGTGTCCGGAAAAATCAATTGAAAATTACCGCCGCCGGCGTCGACGAGGACGACGATACAGGTGACCTTGAGAACGTTGGTTTATTAGACTCTTATGAAAAGGAAGAAGGGGAAAACGATCATGGCATGGACCGAGAGGAAGGCATGCGTAGAATTCAGGTCAGAGTTACTGGTATGACCTGTGCTGCTTGCTCTAATTCGATTGAAACAGCTCTCAGAGCTGTGGATGGTGTCCGTAGGGCTTCTGTTGCTTTGCTTCAGAACAAGGCCGATGTCGTTTTTGATCCTAGTTTGGTCAAGGATGAAGACGTCAAAATTGCAATTGAAGATGCAGGGTTTGATGCAGAGATTATATCTGAACCCAGTATATCATCTAGAACGAAGCTTAATGGAACTCTGGTTGGTCAGTTTACAATTGGAGGTATGACATGTGCAGCATGCGTTAATTCTGTTGAAGGTATTTTGAAAAATATTCCTGGGATCAGTAGAGCTGTTGTTGCATTGGCTACTAATTTGGGGGAAGTTGAGTATGACCCTTCTGTGGTTAGTAAAGAAGATATCATCAATGCAATTGAAGATGCTGGTTTTGAGGCTTCATTAGTGCAGAGCAATATGCAGGACAAAATTACTTTTGCGGTTGTAGGAGTATACACCCTGATGGATGTACATTTTTTAGAAGGAATCCTCAGCAGCTTCAATGGAATAAAACAATTTTATTTTGATCAAGTATCAAATGCGTTGGAAGTTCTCTTTGATCCAGAAGTTGTCAGCTCTAGATCCATAGTTGATGGAATTGAGAAAGGAAGCAATAAGAAATTTAAGTTACATGTGAGAAGCCCATATGCAAGAATGACTTCAAGAGATATAGAAGAAAGTTCAAATATGTTTCGACTTTTTATCTCCAGTCTTTTTTTAAGTATTCCTGTCTTCTTTATACGAGTGATTTGTCCTCACATACCAATAGTATATTCATTATTGCTCCGGAAATGTGGACCTTTCCTTATGGGTGATTGGTTGAAGTGGGCACTAGTGAGTGTTGTGCAATTTGTGGTTGGGAGGCGTTTCTATATTGCAGCATATAGAGCACTTCGAAATGGTTCAACAAACATGGATGTCTTGGTGGCACTGGGAACGTCAGCCTCTTACTTCTACTCTGTCTGTGCTCTTTTGTATGGTGCACTTACTGGATTTTGGTCTCCAACATACTTTGAAACAAGTGCCATGTTGATAACATTTGTATTATTGGGGAAGTATTTAGAATGTCTAGCCAAGGGAAAAACATCAGATGCCATTAAGAAGTTAGTGGAACTTGCTCCAGCTACAGCCTTGCTGCTCGTCAAAGATAAAGGTGGCAAGTATGTTGAAGAAAGGGAAATAGATGCTTTGCTAATTGAGCCTGGTGATACATTAAAAGTTCCTCCTGGTACAAAAGTTCCTGCTGATGGCGTTGTAATATGGGGCTCAAGTTATGTCAATGAAAGTATGGTGACTGGGGAGTCTGTTCCTGTATCGAAGGAGGTCAATTCATCTGTCATTGGTGGTACAATAAATTTACACGGTGCTCTACATATTCAAGCTACAAAAGTAGGATCTGATGCAATCTTAAGCCAAATAATTAGTTTGGTTGAGACAGCACAGATGTGCAAAGCCCCTATTCAGAAGTTTGCTGACTTTATAGCAAGCATATTTGTTCCAACAGTCGTTGGCCTATCATTATTAACATTGTTGGTCTGGTACATTGCAGGGATTCTTGGAGCCTATCCTCAAACCTGGCTTCCAGAAAATGGAAACTATTTTGTATTTTCCCTTATGTTTTCAATATCTGTGGTCGTGATTGCATGTCCATGTGCCCTTGGCCTGGCCACACCAACAGCTGTCATGGTGGCGACAGGAGTTGGGGCAAACAATGGTGTGCTGATCAAGGGAGGTGATGCACTGGAAAGGGCTCAGAAAGTGAAATATGTTATATTTGACAAAACAGGCACCCTAACTCAAGGAAAAGCCTCAGTCACAACGGCCAAAATTTTCTCAAAAATGGATCGTGGAGAATTTCTCAAATTAGTGGCCTCTGCGGAGGCTAGCAGCGAGCATCCACTGGGAAAAGCAATAGTTGAATATGCTCGACACTTCCATTTCTTTAATGAGCCCAACAGTACTGCTCTAAGCCAGGGGATAGAGTCAAATCCCGGATGGCTGTTTGATGTCTCAGACTTCTCTGCTCTGCCAGGGAGAGGTGTACAGTGTTTTATTCAAGGAAAGCGAGTTTTGGTTGGTAACCGGAAGTTGATGGCTGAAAATGGAATCACTGTACCAGTGGATGTAGAAAATTTTGTTGTAGAACTGGAAGAAAGTGCAAAGACAGGGATACTGGTCGCAGTTGATGAAAGTCTAAAGGGTGTTTTAGGAGTTGCAGACCCGCTAAAGAGAGAAGCTGCAGTGGTCATAGAGGGCCTTGAGAAGATGGGTGTCATACCTGTTATGGTAACAGGTGATAATTGGAGAACAGCTCATGCGGTTGCTAAGGAGGTTGGCATTAGAGATGTAAGGGCAGAGGTCATGCCAGCTGGAAAAGCTGAGGTTGTGCTCTCATTTCAATCAGATGGAAGCACCGTTGCAATGGTAGGAGATGGTATCAATGACTCGCCGGCTTTAGCTGCTGCAGATGTTGGCATAGCTATTGGAGCTGGGACTGATATTGCAATAGAAGCTGCTGACTACGTGTTGATGAGGAATAATTTAGAAGATGTTATTACAGCCATTGATCTCTCTAGAAAGACATTTTCTCGTATACGAATGAATTATATATTTGCAATGGCATACAATGTTGTTTCCATACCCGTAGCTGCTGGGGTTTTCTTTCCTATCACGGGGCTGAATTTGCCTCCATGGGCTGCTGGTGCATGCATGGCTCTCTCATCTGTAAGTGTCGTATGTTCTTCATTGCTCCTTAGAAGATACAAAAAGCCAAGACTAACTACATTACTGGAAATAACTGTAGAGTAG 3048 0.4232 MVPSIRDLQLSSLTSGVRKNQLKITAAGVDEDDDTGDLENVGLLDSYEKEEGENDHGMDREEGMRRIQVRVTGMTCAACSNSIETALRAVDGVRRASVALLQNKADVVFDPSLVKDEDVKIAIEDAGFDAEIISEPSISSRTKLNGTLVGQFTIGGMTCAACVNSVEGILKNIPGISRAVVALATNLGEVEYDPSVVSKEDIINAIEDAGFEASLVQSNMQDKITFAVVGVYTLMDVHFLEGILSSFNGIKQFYFDQVSNALEVLFDPEVVSSRSIVDGIEKGSNKKFKLHVRSPYARMTSRDIEESSNMFRLFISSLFLSIPVFFIRVICPHIPIVYSLLLRKCGPFLMGDWLKWALVSVVQFVVGRRFYIAAYRALRNGSTNMDVLVALGTSASYFYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLLVKDKGGKYVEEREIDALLIEPGDTLKVPPGTKVPADGVVIWGSSYVNESMVTGESVPVSKEVNSSVIGGTINLHGALHIQATKVGSDAILSQIISLVETAQMCKAPIQKFADFIASIFVPTVVGLSLLTLLVWYIAGILGAYPQTWLPENGNYFVFSLMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKVKYVIFDKTGTLTQGKASVTTAKIFSKMDRGEFLKLVASAEASSEHPLGKAIVEYARHFHFFNEPNSTALSQGIESNPGWLFDVSDFSALPGRGVQCFIQGKRVLVGNRKLMAENGITVPVDVENFVVELEESAKTGILVAVDESLKGVLGVADPLKREAAVVIEGLEKMGVIPVMVTGDNWRTAHAVAKEVGIRDVRAEVMPAGKAEVVLSFQSDGSTVAMVGDGINDSPALAAADVGIAIGAGTDIAIEAADYVLMRNNLEDVITAIDLSRKTFSRIRMNYIFAMAYNVVSIPVAAGVFFPITGLNLPPWAAGACMALSSVSVVCSSLLLRRYKKPRLTTLLEITVE* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01444 1015 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 56 1011 - -
Pte2g01444 1015 FunFam Copper-exporting P-type ATPase A 147 216 - -
Pte2g01444 1015 SUPERFAMILY HMA, heavy metal-associated domain 146 218 IPR036163 GO:0046872
Pte2g01444 1015 SUPERFAMILY Calcium ATPase, transduction domain A 471 557 IPR008250 -
Pte2g01444 1015 PRINTS P-type cation-transporting ATPase superfamily signature 814 825 - -
Pte2g01444 1015 PRINTS P-type cation-transporting ATPase superfamily signature 889 908 - -
Pte2g01444 1015 PRINTS P-type cation-transporting ATPase superfamily signature 671 685 - -
Pte2g01444 1015 PRINTS P-type cation-transporting ATPase superfamily signature 507 521 - -
Pte2g01444 1015 PRINTS P-type cation-transporting ATPase superfamily signature 912 924 - -
Pte2g01444 1015 PRINTS P-type cation-transporting ATPase superfamily signature 836 846 - -
Pte2g01444 1015 NCBIfam copper ion binding protein 67 130 IPR006122 GO:0005507
Pte2g01444 1015 NCBIfam copper ion binding protein 151 213 IPR006122 GO:0005507
Pte2g01444 1015 PRINTS H+-transporting ATPase (proton pump) signature 861 877 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01444 1015 PRINTS H+-transporting ATPase (proton pump) signature 920 945 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01444 1015 PRINTS H+-transporting ATPase (proton pump) signature 889 905 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01444 1015 ProSitePatterns E1-E2 ATPases phosphorylation site. 673 679 IPR018303 -
Pte2g01444 1015 Gene3D - 150 216 - -
Pte2g01444 1015 NCBIfam HAD-IC family P-type ATPase 768 968 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01444 1015 NCBIfam HAD-IC family P-type ATPase 424 698 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01444 1015 ProSitePatterns Heavy-metal-associated domain. 71 101 IPR017969 GO:0046872
Pte2g01444 1015 CDD HMA 68 131 IPR006121 GO:0046872
Pte2g01444 1015 ProSiteProfiles Heavy-metal-associated domain profile. 65 131 IPR006121 GO:0046872
Pte2g01444 1015 SUPERFAMILY HMA, heavy metal-associated domain 62 136 IPR036163 GO:0046872
Pte2g01444 1015 SUPERFAMILY Calcium ATPase, transmembrane domain M 408 977 IPR023298 -
Pte2g01444 1015 ProSiteProfiles Heavy-metal-associated domain profile. 148 214 IPR006121 GO:0046872
Pte2g01444 1015 FunFam Probable copper-transporting ATPase HMA5 790 946 - -
Pte2g01444 1015 NCBIfam heavy metal translocating P-type ATPase 385 998 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pte2g01444 1015 Gene3D - 439 561 - -
Pte2g01444 1015 CDD HMA 151 214 IPR006121 GO:0046872
Pte2g01444 1015 Pfam E1-E2 ATPase 453 650 - -
Pte2g01444 1015 FunFam Copper-exporting P-type ATPase 769 820 - -
Pte2g01444 1015 CDD P-type_ATPase_Cu-like 312 985 - -
Pte2g01444 1015 Gene3D - 638 946 IPR023214 -
Pte2g01444 1015 FunFam Copper-exporting P-type ATPase A 63 133 - -
Pte2g01444 1015 SUPERFAMILY HAD-like 670 995 IPR036412 -
Pte2g01444 1015 Gene3D - 64 135 - -
Pte2g01444 1015 Pfam haloacid dehalogenase-like hydrolase 667 903 - -
Pte2g01444 1015 FunFam Copper-transporting ATPase 1, putative 439 561 - -
Pte2g01444 1015 FunFam Copper-transporting ATPase RAN1 678 768 - -
Pte2g01444 1015 ProSitePatterns Heavy-metal-associated domain. 154 183 IPR017969 GO:0046872
Pte2g01444 1015 SFLD p-type atpase 653 941 IPR044492 -
Pte2g01444 1015 Gene3D - 768 820 IPR023299 GO:0000166
Pte2g01444 1015 Gene3D - 678 767 IPR023299 GO:0000166
Pte2g01444 1015 SFLD C1.7: P-type atpase like 653 941 - -
Pte2g01444 1015 Pfam Heavy-metal-associated domain 69 129 IPR006121 GO:0046872
Pte2g01444 1015 Pfam Heavy-metal-associated domain 152 212 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01444 Pte-Chr2 25267774 25275572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01444 1 1016 Primary Pumps ATPases AT5G44790 73.581 0.0 1511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01444 K17686 - cave:132170848 1565.82