Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01428 ATGGCATCTTCTCAGGTTGAAGTTGCCTCTTCTGCACCATTTGGCTGTGTTCTCAGAGACCACACCCGCAGAAATGGATGCAGGGATAACAATCCCAAAGCTGCACAGGATACTCTCCATAAAAATCTCAAGAACTTGGTGAGGAATCATCTCCATGATGGCATTACTGTATCTTCCGATTACGCCAGACATGACAATAACCATGACCTTGACCGTGTGCATAACCAATGCCAACCTGCCGACTCTTGGTCTGCTCCTCAAGCGGAAGAACAACGAGGGCAGCAAGGGGCGGTTTCTATACCTGCGTACGACTCGTCCATGTCGGCTTGCTTCAACGATATATCGGAGCTCGGCGCTTCCTCCCTGGTTCAGATTTGGGAGAAGAGGCTGACCAGGTCAAACAGCAACAAAACCAATTCCGCCTCACCCACCAGCACTTCCAGCCCTGGTGCCTGCATTAATGAAGAAGAGAGCAGGGCATCTGAAACAGAGGAGCGTGGGAACGAACACCAAGGGGACGGGAATACTGAGCATCAATCCCATCATTCGACTCAATCAGAAGCTGAAAAACTCGAGAGGGTTAGGGTTGCTGAAATAATACGGAGGTTGTCAGGTTCGAGTGGAGAAAGCAACCATGATGTGGAGCATTCGTACGCTTGCATGTTAGATCAGCAAGTAGAGCAGAGGATGTTCACACCTTCACTCAGATTGAGAGGGAGGCAAGCATTCAACGATCTGATAATGCAGATGGAGCGTGACAGAAATGACGAGCTCGAAGTTCTATCAAAACGTGCAGCAGTTTCCAAGTTCACACACAGAGGCCGCATTCAGGCAATGCTTCGGCTTAAGTTACTTCAGCGTGGAGTGGCGTTTTATGATCCTCCTTATCAACATCCTTCAAGAGCTTCTTGTGTTAACAAGGCTCCTCATAGTCAAAGTTGTGGCACCATCACTCACCTCAGGGAGAGATTTAATGCAGGTAGTGATCATGGAAACAAAGTGAAGAGTACAGAATCATCTAATGCAAATCAGAAAAGGTCTGCAGGGGAAACAAGGAATAACCCCACCCAACCAAACAGTTTCAGAGGCGATGATAGCCAACGCGAAGACAACGGTCAGAGTGATGGCGATGATAAAGGTGAAGGCAATCCTCCTTACACGAACCAAGGTCGAAATACAAGTAATAGTACTAAAAGTAAAGCACGCATGGTAAAGGAGTCATTGTCACGTAACAGAGTTCTTGATCTTTATGAATATGTTGAAAATAATGTTCGAACTTCAGTTTTCTCAAAGTCATCAGTGGATCCCAGTAATGCGACATGGACCACGCAGGCCGAGGCAAGCTTAGGGACAAGCATTGACTTGCCAGCTGAAAATGCCAAGGCAACTCGAAATGGCGCTGTGCCTAACAACCTTGAACAAAAGAAAGTTGCTGATGAGGCAACTCCATCCACAGATGGTTGCGATGGAAATGGTGGAACATACACCCAGCAAGAGGTTAATGGAAGGATTAGCCACCAATATGGTGAAAGCAACTATCATGAGATGACTGACGAGATAGAGGAAAGCTACGGGTACGAAGGTGAAACCAGCAATTACGATTGGATAAGCAATATTTCTCGCCCTCGTAGTTTCTGGGAAAGCAGGAGGCAAGAATGGTACAGAGAGATGCTTAGCGCATGCTCAGATAATGATCAGGACTTACGTCAACTCATTGAAAGAAGAACAGTATCAAATTTCCTCTCCAGCGATCTTCGAGAAAGAATGGACCAATTCATGGTTTGTCACTTGGAAAGACAGTCAATTATGATGGAAAATGGGGAAAGCGATGCAGAATCAATGGGGCAGTTTACGGAATTTATTCACGAGTATTCGCCTTCTGCAGTTCATCATGAACAAGATGACAGAGCAGAGAATAAAGAGCAGGAGCAAAGGCAAGAGGAAGAACATAAGCACGATCTGGAATTGAGTTTGAGCAGTAGCCAAGGCCAGAATCATGACATCAGTGATGACTTCGATCAATCCGTATCTTCTCCTCATATGCCTTCTCCTTCTCTGGTGAGATCATGGAGTTACAGAGACAATGACCCTGGAGAAGATTCTGATCGACCTTCCCCACAATGTTGTCACACGTTCTATGATAACAGTCCACGCAAGTCTCCATCCAATAATCACATTTCAGTTGAAATGGAACTCATATACGACTTGAGATTCCAAATGGAGCAACTCCATCGTGAGATGGCTGAGCTGAGGAAATCAATCAAGAGCAGCATGGACTTGCAAAATTGTTTTAAAGATTCAATGAATCCTGATGTTCACTCAGTCAAACGTGAGGCAAGTGAGGCAAAGGAGGAAAGCTGTCGTGTATGCCATGAAATGAAGGTTGACACAGTCTTATACAGATGTGGACACATGTGTGCATGCGTGAAGTGTGCCAATGAGCTGCAGTGGAGCAGTGGAAAATGTCCAGTATGCAGAGCAGCCATAGTGGATGTGATTCGAGTGCATGTGGATGTTTAA 2520 0.4583 MASSQVEVASSAPFGCVLRDHTRRNGCRDNNPKAAQDTLHKNLKNLVRNHLHDGITVSSDYARHDNNHDLDRVHNQCQPADSWSAPQAEEQRGQQGAVSIPAYDSSMSACFNDISELGASSLVQIWEKRLTRSNSNKTNSASPTSTSSPGACINEEESRASETEERGNEHQGDGNTEHQSHHSTQSEAEKLERVRVAEIIRRLSGSSGESNHDVEHSYACMLDQQVEQRMFTPSLRLRGRQAFNDLIMQMERDRNDELEVLSKRAAVSKFTHRGRIQAMLRLKLLQRGVAFYDPPYQHPSRASCVNKAPHSQSCGTITHLRERFNAGSDHGNKVKSTESSNANQKRSAGETRNNPTQPNSFRGDDSQREDNGQSDGDDKGEGNPPYTNQGRNTSNSTKSKARMVKESLSRNRVLDLYEYVENNVRTSVFSKSSVDPSNATWTTQAEASLGTSIDLPAENAKATRNGAVPNNLEQKKVADEATPSTDGCDGNGGTYTQQEVNGRISHQYGESNYHEMTDEIEESYGYEGETSNYDWISNISRPRSFWESRRQEWYREMLSACSDNDQDLRQLIERRTVSNFLSSDLRERMDQFMVCHLERQSIMMENGESDAESMGQFTEFIHEYSPSAVHHEQDDRAENKEQEQRQEEEHKHDLELSLSSSQGQNHDISDDFDQSVSSPHMPSPSLVRSWSYRDNDPGEDSDRPSPQCCHTFYDNSPRKSPSNNHISVEMELIYDLRFQMEQLHREMAELRKSIKSSMDLQNCFKDSMNPDVHSVKREASEAKEESCRVCHEMKVDTVLYRCGHMCACVKCANELQWSSGKCPVCRAAIVDVIRVHVDV* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01428 839 MobiDBLite consensus disorder prediction 363 377 - -
Pte2g01428 839 Coils Coil 637 657 - -
Pte2g01428 839 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 764 837 IPR013083 -
Pte2g01428 839 MobiDBLite consensus disorder prediction 385 402 - -
Pte2g01428 839 Coils Coil 740 760 - -
Pte2g01428 839 MobiDBLite consensus disorder prediction 133 191 - -
Pte2g01428 839 MobiDBLite consensus disorder prediction 133 154 - -
Pte2g01428 839 MobiDBLite consensus disorder prediction 330 362 - -
Pte2g01428 839 MobiDBLite consensus disorder prediction 78 97 - -
Pte2g01428 839 MobiDBLite consensus disorder prediction 628 724 - -
Pte2g01428 839 CDD mRING-HC-C3HC5_NEU1 784 835 - -
Pte2g01428 839 MobiDBLite consensus disorder prediction 157 191 - -
Pte2g01428 839 MobiDBLite consensus disorder prediction 657 690 - -
Pte2g01428 839 ProSiteProfiles Zinc finger RING-type profile. 787 826 IPR001841 -
Pte2g01428 839 Pfam Zinc finger, C3HC4 type (RING finger) 784 831 - -
Pte2g01428 839 SUPERFAMILY RING/U-box 779 831 - -
Pte2g01428 839 PANTHER BNAC05G24000D PROTEIN 1 838 - -
Pte2g01428 839 MobiDBLite consensus disorder prediction 463 497 - -
Pte2g01428 839 MobiDBLite consensus disorder prediction 628 656 - -
Pte2g01428 839 MobiDBLite consensus disorder prediction 708 724 - -
Pte2g01428 839 MobiDBLite consensus disorder prediction 326 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01428 Pte-Chr2 23480715 23484482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01428 787 838 C3H Transcription Factor Family AT3G06140 36.538 5.31e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01428 - - qsa:O6P43_013357 505.368