LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte2g01424	ATGGCATGCCCTAGTTGCAGTCCTCTACTGTTTCTCATAGTTTTGCTGCTTGCTTCCTCTTCCTCGTGGGCAGATGAACTGAATGAAGGCTTTGACATTGACCCTTCAGGGCAGGTCTTTGCTCTTGATGTCCCTTCATTAATAGAGCACTCCTTGCCATCTGATGATGGTGTGCTATACTTCGGTTACTATCGCAAGACCTGTCCGTCTTTCGAAGCGATTGTCGGCAACAAATTGAATGAATGGATTAAAAGGGATATTACTCTTGCTGCCAGTCTCATGAGGTTGCACTTTCATGACTGTGCTGTACGGGGATGCGACGCCTCCATTTTGTTGAAGCATCAAGGAAGTGAGAGGACGGCAGAGGCAAGTAAAACACTGCGGGGGTTTGAAGTAATTGATGACATCAAAGCAGAGTTGGAGAAGGACTGTCCGAAGACAGTTTCATGTGCAGACATTCTTACAGCTACCACAAGAGATGCCACTGTTGCGTTGGGTGGTCCGTACTGGACAGTGCCTTACGGAAGAAAAGATGGGTTGGTTTCATTTGCTAATGAAGCTGAAGAGCGAGTGCCAATGGGGCACGAGAACATCACTTCTTTGATTGAGTTTTTCCAATCAAACGGTCTCAATGTGCTTGACTTGGTCGTTCTCTCGGGTGCACATACCATTGGCAGATCCTCATGCAGTGTTATACAAAAAAGGCTCTACAATTTCCATGGTACGGGCAAACCAGACCCTTCGATTGATGCTAAGTACCTCAACTACTTGCAGAGGAAGTGTAGATGGGGCTCAGACTATGTTGAGCTAGATGCCACTACTCCCGGGACTTTTGATGCTGTGTATTACAGGAATCTTGAGAAGAAAATGGGGTTGCTAAACACAGATCAGTTGCTTTATAGCGATCCAAGAACCTTACCGCTGGTCTCTTCATTCATTAGGTCGCCGGCAACGTTCCACCACCAGTTTGCGGTGTCCATGGCAAAGCTTGGGAGTATTCAAGTGATCACTGAACAAGACGAAAGTGAAATCAGAACCAACTGCAATTTTGTCAATTCTTACTAA	1065	0.461	MACPSCSPLLFLIVLLLASSSSWADELNEGFDIDPSGQVFALDVPSLIEHSLPSDDGVLYFGYYRKTCPSFEAIVGNKLNEWIKRDITLAASLMRLHFHDCAVRGCDASILLKHQGSERTAEASKTLRGFEVIDDIKAELEKDCPKTVSCADILTATTRDATVALGGPYWTVPYGRKDGLVSFANEAEERVPMGHENITSLIEFFQSNGLNVLDLVVLSGAHTIGRSSCSVIQKRLYNFHGTGKPDPSIDAKYLNYLQRKCRWGSDYVELDATTPGTFDAVYYRNLEKKMGLLNTDQLLYSDPRTLPLVSSFIRSPATFHHQFAVSMAKLGSIQVITEQDESEIRTNCNFVNSY*	355

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte2g01424	354	Gene3D	-	62	352	-	-
	Pte2g01424	354	FunFam	Peroxidase	192	330	-	-
	Pte2g01424	354	CDD	secretory_peroxidase	59	351	IPR033905	GO:0004601\|GO:0042744
	Pte2g01424	354	PANTHER	PEROXIDASE 25-RELATED	18	339	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pte2g01424	354	ProSitePatterns	Peroxidases proximal heme-ligand signature.	214	224	IPR019793	-
	Pte2g01424	354	PRINTS	Plant peroxidase signature	325	338	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pte2g01424	354	PRINTS	Plant peroxidase signature	128	141	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pte2g01424	354	PRINTS	Plant peroxidase signature	147	157	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pte2g01424	354	PRINTS	Plant peroxidase signature	92	112	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pte2g01424	354	PRINTS	Plant peroxidase signature	285	302	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte2g01424	Pte-Chr2	23262421	23263786	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte2g01424	56	353	Peroxidase	AT1G30870	59.000	8.49e-126	363

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte2g01424	K00430		-	gmx:100527587	485.723

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