Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01408 ATGTACGTAGATATATACAGTATGGACGCCTCACCACAAAGTTGGGTTCCTGAATTGGAATCAGAGGATGATGATAATTTCACCGATCAAGGTGATCGTCTGAACTCTTCTGATCTTCAAGTTGATGATTATGACATAGAAACCTCATCACAGAAGACATCAAGTTCAGATGAATTCAATCAGAAACTAGTTGATCTTTCAGCCCTTATCCCCAATTCAAACAAGATAGACGAGGTTTCTGTTATTTCGAAGACTATCGAGTACTTGAAGGAGCTTCATGAAACTATTGCGTTGTTGGAAGATAAGGTGGGGATGAAACGTGATGAGGCAGTTCCATTGAGCAAGCAATCTGAAGTGTCGACTGAGAAAGATGTCTCTTCCAATAGCAAGATTGAAGAAAACACTGGTCCCGAGATCGGTACTTCTAGTGCGATACTAACAGAAATAGAAGCAAGATTCCTGAAAAAAGATGTGCTTGTTCGAATCCACTGCATGAAATTGAAAGGACTGGTCGTCAAAATTCTTAGCCTCATGAAAGATATCCATCTAACTGTGATCCGCAACAGTGTTCTTCGTTTTGGAGACTCCCATTTCGAGATAAGCATTGTTGCCCAGGCAAGTACATAG 627 0.4067 MYVDIYSMDASPQSWVPELESEDDDNFTDQGDRLNSSDLQVDDYDIETSSQKTSSSDEFNQKLVDLSALIPNSNKIDEVSVISKTIEYLKELHETIALLEDKVGMKRDEAVPLSKQSEVSTEKDVSSNSKIEENTGPEIGTSSAILTEIEARFLKKDVLVRIHCMKLKGLVVKILSLMKDIHLTVIRNSVLRFGDSHFEISIVAQAST* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01408 208 Coils Coil 89 109 - -
Pte2g01408 208 Gene3D - 56 102 IPR036638 GO:0046983
Pte2g01408 208 MobiDBLite consensus disorder prediction 41 57 - -
Pte2g01408 208 MobiDBLite consensus disorder prediction 110 137 - -
Pte2g01408 208 PANTHER BHLH TRANSCRIPTION FACTOR 58 206 - -
Pte2g01408 208 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 57 105 IPR036638 GO:0046983
Pte2g01408 208 MobiDBLite consensus disorder prediction 1 57 - -
Pte2g01408 208 MobiDBLite consensus disorder prediction 114 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01408 Pte-Chr2 22872354 22873887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01408 57 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 34.228 3.02e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01408 - - qsu:112029780 120.938