Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01399 ATGGAAGTGTCTGAATCAATTACCATGGATGATAAGTTGCCCAGAAAAAATGAAGGCAAGCCAATTCGATGCAGAGCTGCTGTTTGTCGCACATCAGGTGAGCCTTTGAGGATCGAGGAAGTTATAGTTGCGCCGCCCATGCCCCGTGAAGTTCGTGTTAAAATTATATGCACATCTCTCTGCCACAGTGACATCACTTTCTGGAAACTCAAGGACCCTCCTGGAGTTGTCCCAAGAATTCTGGGCCACGAAGCGATCGGAGTCGTGGAAAGTGTGGGGGAGGATGTGAATGAAGTGGTTCAAGGAGATATTGTTGTCCCAACTTTCCTTCCAGATTGTCAAGAGTGCAGAGATTGCTGCTCAAGGAAGAGCAATATTTGCTCTAAGCTTCCGTTCAAGGTGTCTCCATGGATGCCAAGATACGAGACCAGCAGATTCAGTGATCTAAATGGCGAACCTATATATCATTTCTTGTATGTGTCAAGTTTCAGTGAGTACACAGTTGTAGATATCGCGCACCTCACAAAAATTGAACCGTCCATTCCCCCAGAAAAGGCTTGTCTTCTGAGTTGTGGAGTATCAACTGGTGTAGGTGCTGCTTGGAGAACGGCAAATGTTGAACCTGGATCAACTGTTGCTATATTTGGCCTGGGTTCGATCGGATTAGCTGTTGCTGAGGGAGCTAGACTTTGTGGAGCTGCCAGAATAATTGGTGTGGATGTGAACCCCAACAAATTTGAAATTGGGAAAAAGTTCGGAGTCACAGATTTTGTGAATGCCACAGAATCAGCAAGTCAGGTAATCAATGAAATGACTGGTGGAGGAGCGGACTACTGCTTTGAATGCGTTGGGATGGCTTCATTGGTGCACCAAGCATATGCCTGCTGTCGCACGGGTTGGGGAAAAACTATTGTTTTGGGAGTAGATAAGCCTGGTTCTACCTTGACCCTTAGCTCCAGTGAGGTCCTTCACAGTGGGAAATGTCTTATGGGATCCTTATTTGGAGGACTGAAACCAAAATCTGACATCCCTATTCTCCTCAAGCGTTACATGGACAAGGAACTCCAGCTAGATTTGTTCGTCACACATGAAGTGGGTTTTGACGAGATCAACAAAGCCTTCAAGCTGCTCACTGAAGGAGAATGTCTTCGATGCGTGATTTGGATGAATAAATAG 1176 0.4583 MEVSESITMDDKLPRKNEGKPIRCRAAVCRTSGEPLRIEEVIVAPPMPREVRVKIICTSLCHSDITFWKLKDPPGVVPRILGHEAIGVVESVGEDVNEVVQGDIVVPTFLPDCQECRDCCSRKSNICSKLPFKVSPWMPRYETSRFSDLNGEPIYHFLYVSSFSEYTVVDIAHLTKIEPSIPPEKACLLSCGVSTGVGAAWRTANVEPGSTVAIFGLGSIGLAVAEGARLCGAARIIGVDVNPNKFEIGKKFGVTDFVNATESASQVINEMTGGGADYCFECVGMASLVHQAYACCRTGWGKTIVLGVDKPGSTLTLSSSEVLHSGKCLMGSLFGGLKPKSDIPILLKRYMDKELQLDLFVTHEVGFDEINKAFKLLTEGECLRCVIWMNK* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01399 391 Gene3D - 196 332 - -
Pte2g01399 391 FunFam S-(hydroxymethyl)glutathione dehydrogenase 196 332 - -
Pte2g01399 391 FunFam Alcohol dehydrogenase 6 27 208 - -
Pte2g01399 391 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 82 96 IPR002328 GO:0008270|GO:0016491
Pte2g01399 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 181 352 IPR036291 -
Pte2g01399 391 SUPERFAMILY GroES-like 340 388 IPR011032 -
Pte2g01399 391 Pfam Zinc-binding dehydrogenase 220 340 IPR013149 -
Pte2g01399 391 Gene3D - 27 384 - -
Pte2g01399 391 SUPERFAMILY GroES-like 18 205 IPR011032 -
Pte2g01399 391 PANTHER ALCOHOL DEHYDROGENASE 19 387 - -
Pte2g01399 391 Pfam Alcohol dehydrogenase GroES-like domain 49 176 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01399 Pte-Chr2 21585011 21587582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01399 49 191 Monolignol Biosynthesis Gene Families AT4G37970 28.472 1.88e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01399 K00121 - qsu:112018306 649.432