Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01398 ATGGGGATTTGCTGTGGACTGCTGAGGAGGTCCTTTGGAGTGTTCTGCAGTGTCCAGTCCCATGAGATATCAATAACCACGGCAGATTCCATTCCTGAACAACCGAAACAAGAAGGTAGCTCGAACTATGACGACTTTCATAGACCAAAAATCTCCACAAGGCCTCATCAACATTCAGAAAAAGGACCCATTCTAGGCAAACCCTACGTTGATATTAGTTTCATATATTCCATGGAAAAAGAACTTGGCAGAGGGCAGTTTGGCGTTACTTATCTTTGCACTGAAATCGCATCGAGACGAAAGTATGCATGCAAGTCCATAGCAAAGGTAAAGCTGGTGTCTAAGCAAGACATTGAAGATGTTAGAAGAGAAGTCCTGATCTTACAACATCTCTCTGGGCAACCAAACATTGTGGAATTTAAGGGCGCTTACGAGGACAAACATCATGTTCATTTGGTGATGGAGTTGTGCTCGGGTGGCGAGCTCTTTGATCGTATAATTGCCAAAGGCTCTTACTCCGAGCGTGAGGCTGCTGTAATCTTTCGGCAGATCGTGAATGTGGTTCATGTGTCCCATTTCATGGGGGTCATGCATCGTGATATAAAGCCTGAGAACTTTTTGTTGGCAAATAAAGAGGAGGATTCCCCACTCAAAGCCACGGATTTTGGACTGTCTGTCTTCATTGAGGAAGGTAAAGTTTACAGAGACTTTGTTGGAAGTGCCTATTATGTGGCCCCAGAAGTGTTACACCGAAGCTACGGGAAGGAGATAGATGTCTGGAGTGCTGGAGTCATTCTCTACATACTCTTAAGTGGGGTGCCACCCTTTTGGGGCGAGACCGAGAAAGCCATTTTCGATGCAATTCTACAGGGAAAAGTGGACTTGGAGAGCTCACCGTGGCCTTCTATATCAGCTCCAGCAAAGGATCTTATCAGGAAAATGTTGGAGATGGATGCAAACAAAAGAATTACAGCAGCTAATGCCCTCGAGCATCCCTGGATGAAAGAGGGCGGTGAAGCATCGGACAGACCTTTAGACAGTGCTGTTTTAATTAGGATGAAACAATTCCGAGCAATGAACAAGTTCAAGAAGCTTGCTTTAAAGGTAATAGCAGAAAACCTCGCAGAGGAAGAGATCATAGGGTTGAAACAAATGTTCAACAACATGGACACGGATGGCAGTGGGACAATTACTTTGGAAGAGCTGAAAACTGGATTGACAAGACTTGGATCTAAACTTACAGAATACGAAATAAAGCAGCTAATGGATGCTGCCGATGTTGATAATAATGGAACTATCGATTACGTTGAATTCGTCACTGCTACCATGCATCGGCATAGGCTTGACAAGGAAGACCACCTTTACAAGGCTTTCCAATACTTCGACAAAGATGGCAATGGGTTTATCACAAGAGATGAGCTTAGACATGCTATGACTGAATATGGGATGGGGGACGAAGCTACAATAGATGAAGTCATCAACGATGTGGACACCGATAAAGACGGTAAAATCAACTATGGCGAATTTGTGGCCATGATTAGGGCTGAGAGAAGCTCCGATCCAATTTGA 1569 0.443 MGICCGLLRRSFGVFCSVQSHEISITTADSIPEQPKQEGSSNYDDFHRPKISTRPHQHSEKGPILGKPYVDISFIYSMEKELGRGQFGVTYLCTEIASRRKYACKSIAKVKLVSKQDIEDVRREVLILQHLSGQPNIVEFKGAYEDKHHVHLVMELCSGGELFDRIIAKGSYSEREAAVIFRQIVNVVHVSHFMGVMHRDIKPENFLLANKEEDSPLKATDFGLSVFIEEGKVYRDFVGSAYYVAPEVLHRSYGKEIDVWSAGVILYILLSGVPPFWGETEKAIFDAILQGKVDLESSPWPSISAPAKDLIRKMLEMDANKRITAANALEHPWMKEGGEASDRPLDSAVLIRMKQFRAMNKFKKLALKVIAENLAEEEIIGLKQMFNNMDTDGSGTITLEELKTGLTRLGSKLTEYEIKQLMDAADVDNNGTIDYVEFVTATMHRHRLDKEDHLYKAFQYFDKDGNGFITRDELRHAMTEYGMGDEATIDEVINDVDTDKDGKINYGEFVAMIRAERSSDPI* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01398 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Pte2g01398 522 FunFam Calcium-dependent protein kinase 1 78 161 - -
Pte2g01398 522 SMART efh_1 453 481 IPR002048 GO:0005509
Pte2g01398 522 SMART efh_1 417 445 IPR002048 GO:0005509
Pte2g01398 522 SMART efh_1 381 409 IPR002048 GO:0005509
Pte2g01398 522 SMART efh_1 488 516 IPR002048 GO:0005509
Pte2g01398 522 MobiDBLite consensus disorder prediction 27 61 - -
Pte2g01398 522 Pfam EF-hand domain pair 452 514 IPR002048 GO:0005509
Pte2g01398 522 Pfam EF-hand domain pair 382 442 IPR002048 GO:0005509
Pte2g01398 522 ProSitePatterns EF-hand calcium-binding domain. 426 438 IPR018247 -
Pte2g01398 522 SUPERFAMILY EF-hand 374 513 IPR011992 -
Pte2g01398 522 SMART serkin_6 76 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01398 522 ProSitePatterns EF-hand calcium-binding domain. 462 474 IPR018247 -
Pte2g01398 522 ProSiteProfiles Protein kinase domain profile. 76 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01398 522 CDD STKc_CAMK 76 333 - -
Pte2g01398 522 Pfam Protein kinase domain 76 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01398 522 Gene3D - 342 518 - -
Pte2g01398 522 Gene3D Phosphorylase Kinase; domain 1 78 161 - -
Pte2g01398 522 ProSiteProfiles EF-hand calcium-binding domain profile. 449 484 IPR002048 GO:0005509
Pte2g01398 522 FunFam calcium-dependent protein kinase 1 162 341 - -
Pte2g01398 522 FunFam Calcium-dependent protein kinase 1 342 517 - -
Pte2g01398 522 ProSiteProfiles EF-hand calcium-binding domain profile. 485 519 IPR002048 GO:0005509
Pte2g01398 522 ProSitePatterns Protein kinases ATP-binding region signature. 82 109 IPR017441 GO:0005524
Pte2g01398 522 Gene3D Transferase(Phosphotransferase) domain 1 162 341 - -
Pte2g01398 522 PANTHER SERINE/THREONINE-PROTEIN KINASE 73 509 - -
Pte2g01398 522 ProSitePatterns EF-hand calcium-binding domain. 390 402 IPR018247 -
Pte2g01398 522 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Pte2g01398 522 MobiDBLite consensus disorder prediction 40 61 - -
Pte2g01398 522 SUPERFAMILY Protein kinase-like (PK-like) 76 344 IPR011009 -
Pte2g01398 522 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Pte2g01398 522 ProSiteProfiles EF-hand calcium-binding domain profile. 413 448 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01398 Pte-Chr2 21490227 21494529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01398 17 515 EF-hand Containing Proteins AT3G20410 65.949 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte2g01398 Pkinase 7.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01398 K13412 - qsa:O6P43_016312 794.267