Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01392 ATGGATAAGTCGTCCTCATCGGTAATGGAGGCCTTCGAGAAGCTGGAGAAGGTTGGGGAAGGAACGTACGGAAAGGTGTACAGAGCGAGAGAGAAAACGAGCGGGAAGATCGTGGCGCTGAAGAAGACTCGACTCCATGAGGACGAAGAAGGCGTTCCTCCGACAACTCTCCGCGAGGTCTCCATCCTGCGGATGCTGTCTAGGGATCCCCACATCGTGAACCTCATGGATGTGAAGCAAGGTATCAACAAGCAAGGGAAGACTGTTCTCTATTTGGTGTTCGAGTACATGGATACTGATCTGAAGAAGTTCATCCGCTCGTTTCGTCAATCTGGAGAAAGCATTCCTTTCAAAACCGTCAAGAGCTTGATGTACCAACTCTGCAAGGGCGTTGCATTTTGCCATGGTCATGGAATTTTGCACAGGGATCTCAAGCCTCACAATCTCCTCTTGGATCGAAAGACTATGATGCTTAAAATAGCTGACCTTGGACTTGCTCGTGCATTTACTGTTCCCATCAAGAAATACACTCATGAGATTCTGACCCTCTGGTATAGAGCACCTGAAGTTCTTCTTGGGTCTACCCATTACTCCATGGCTGTTGATATCTGGTCTGTTGGTTGCATTTTTGCTGAACTTGTCACAAAGCAAGCACTCTTTCCTGGTGATTCCGAACTGCAGCAACTCCTGCATATCTTCAGGCTACTGGGTACACCAAATGAACAAATATGGCCTGGCGTGAGCAAGCTAATGAATTGGCATGAGTACCCGCAATGGAGTCCTCAAAGTTTGTCCACTGCTGTTCCTAATCTGGACCAAGATGGGTTGGATCTTCTTTCTCAAATGCTGCAGTATGAGCCCTCGAAAAGGATCTCTGCGAAAAAGGCCATGGAACACCGTTACTTCGATGATCTGAACAAGGCATGTTTCTAG 933 0.4759 MDKSSSSVMEAFEKLEKVGEGTYGKVYRAREKTSGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHIVNLMDVKQGINKQGKTVLYLVFEYMDTDLKKFIRSFRQSGESIPFKTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLLDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGSTHYSMAVDIWSVGCIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEQIWPGVSKLMNWHEYPQWSPQSLSTAVPNLDQDGLDLLSQMLQYEPSKRISAKKAMEHRYFDDLNKACF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01392 310 Pfam Protein kinase domain 12 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01392 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Pte2g01392 310 PANTHER CELL DIVISION PROTEIN KINASE 10 303 - -
Pte2g01392 310 SUPERFAMILY Protein kinase-like (PK-like) 7 306 IPR011009 -
Pte2g01392 310 ProSiteProfiles Protein kinase domain profile. 12 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01392 310 FunFam Cyclin-dependent kinase 2 100 309 - -
Pte2g01392 310 Gene3D Phosphorylase Kinase; domain 1 8 98 - -
Pte2g01392 310 Gene3D Transferase(Phosphotransferase) domain 1 100 309 - -
Pte2g01392 310 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Pte2g01392 310 FunFam Cyclin-dependent kinase B2,2 8 98 - -
Pte2g01392 310 SMART serkin_6 12 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01392 Pte-Chr2 21144935 21147099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01392 3 305 Core Cell Cycle Gene Families AT1G20930 85.809 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pte2g01392 Pkinase 2.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01392 K07760 - rcu:8273672 577.785