Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01372 ATGTTTGACAAATGTTCTTCCCTTCGTTACTTGTCTTTAGCTGGAAATATGTTGGAAGGACCAATTCCCAGTACACTGTCTAGTTGCACCTTGTTGGATTACCTCAATCTTTCCAGCAATCGTTTCGCTGGTGACCCTGGTTTTAGTTCTGGGATTTATTCAATGAAAAAGTTGAGAAGTTTGGACCTTTCGAACAATGTGTTTTCAAGTTCAATTCCTAATGGTATATCAGGCCTACATTTCCTCAGAGAGTTAATGTTACAAGGGAATAACTTTGCCGGTGCATTACCTGGTGATCTCGGATTGTGCCCCCATTTGAATAGAATTGATTTCAGTCATAATATGTTCAATGGAGGACTACCAGAGACAACTCAGAGGCTAATTTCTTTAACCACACTGAAGATATCAAATAATCAGTTAACAGGTGAAGTTCCACAGTGGATTTCCAACATGGTCAGTTTGGAATTTTTAGAACTTTCGAGAAATGGTTTCACTGGAAGTCTTCCATCATCAATAGGTGAAATGAGATCACTGAGTGTCCTCATCTTGTCAAGTAATAAACTTGGAGGAAATATTCCAGGGTCATTGAGTTACTGTACCAAACTGTCAGTTCTAAGGCTTAGAGACAACTGCTTCAATGGCAATATACCTGAAGGCTTGTTTGGTCTAGGATTAAAAGAAGTGGACTTGTCAAACAATCAGCTGATGGGTTCTATTCCACAAGGTTCAGGTGGAATCTTTGAAACTCTTTCCATATTGGACCTTTCTAGTAATGATTTCCATGGAAACATACCTTCAGAAGTGGGGCTTTTCTCAAACCTGAGATACTGTAATCTCTCTTGGAATAATCTACAATCAAGTATGCCTCCAGAGCTGGGGTTCTCTCAGAACCTAACAGTTTTGGATCTGCGATACAACCGCCTCAACGGTTCCATTCCAGGAGATGTCTGTGACTCAGCTAGTCTTGGAATTCTTCAATTAGATGGAAATCTGTTCAGTGGATCAATCCCAGAAGAGATTGGAAACTGTTCATCTCTCTATTTACTGAGCTTGTCTCACAATAACTTGACTGGCTCAATACCCAAATCCATGTCAAAGTTAAGTAATCTAAAAATTTTGAATTTAGAATTCAATGAACTTGATGGTGAGATACCGCAGGAGCTTGGAAGACTCGACACACTACTATCAGCTAATATCTCATACAACAGACTTGAAGGCAGACTGCCAGTTGGGAGTATATTTCCTCACTTGGATAAAAGTTCATTGCAAGGAAACTTAGGTCTTTGCTCACCTTTGTTGAATGGACCATGTATAATGAACGTTCCAAAACCCTTAATGCTTGACCCCAATGCATTTGGCAGCCAAATCAGTCACAATGACAGCGATGTGTCTTCTTTGCCAAAAAATGGCCATCGCCGCAGTTTCTTCAGCATTTCAGCAATTGTAGCCATTTCGGCAGCATTCATGATTGTTATAGGGGTCATTGTTATTACCCTTCTCAATTTATCTACGAGGAAGAGGCTAGAATTTGTGGAAAATGCCTTGGAAAGAACGTGTTCTAGTTCTTCAAGATCAGAAAGTACACCAACAGGAAAGCTCGTTCTGTTTGATTCGAAGACGTCGACGGATTGGATCAGCAATCCAGAATATTTGCTCAGCAAGTCATGCGAGATAGGCGAAGGAGTCTTTGGAACTGTCTACAAAGTTCCATTGGGGTTACAAGGAAAAGTTGTAGCTATCAAAAGGCTCGTCATAACAAATATAATCCAATATCCTGAAGATTTCGATAGGGAAGTCCGTATGCTTGGAAAAGCCAGGCATCCAAATCTGATAGCTCTGAAAGGATACTACTGGACTCCTCCAATGCAGCTTCTGGTAACAGAATATGCACCAAATGGCAGCCTGCAGATGAAGCTGCATGAAAGGCTCCCTACTGCTCCTTCTGTTTCTTGGGACAACAGATTCAAGATATTGCTTGGAACAGCCAAAGGGCTTGCATATTTACATCACTCAGTTCATCCACCAATCATCCATTACAATTTGAAACCAAACAACATTTTGCTTGATGAGGACTACAATGCCAAGATTTCGGATTTCGGATTAGCAAGGTTACTGACAGAGCTGGACAAGCATGTGATGAGTAACCGGTTTCAAAGTGCTCTAGGATATGTGGCACCAGAGTTGGCATGTCAAAGCCTAAGAGTCAACGAAAAATGTGATGTTTATGGTTTCGGAGTGATGATCCTTGAGGTTGTGACTGGAAGAAGGCCGGTGGAATATGGGGAAGACAATGTTGTTATACTAAGTGACCTTGTTAGAGTTCTGCTAGAACAAGGGAATGTTCTTGATTGTGTGGATCAAAGCATGTCTGAGTATTCAGAGGACGAAATCTTACCTGTGCTCAAGTTGGCAATGGTTTGCACATCACAGAGACCTTCAGCTAGGCCTTCTATGGCTGAAGTGGTGCAGATTTTGGAAGTGATTAAGGTCCCCCCAACCCAAAGAATGCAACTGTTTTGA 2520 0.4127 MFDKCSSLRYLSLAGNMLEGPIPSTLSSCTLLDYLNLSSNRFAGDPGFSSGIYSMKKLRSLDLSNNVFSSSIPNGISGLHFLRELMLQGNNFAGALPGDLGLCPHLNRIDFSHNMFNGGLPETTQRLISLTTLKISNNQLTGEVPQWISNMVSLEFLELSRNGFTGSLPSSIGEMRSLSVLILSSNKLGGNIPGSLSYCTKLSVLRLRDNCFNGNIPEGLFGLGLKEVDLSNNQLMGSIPQGSGGIFETLSILDLSSNDFHGNIPSEVGLFSNLRYCNLSWNNLQSSMPPELGFSQNLTVLDLRYNRLNGSIPGDVCDSASLGILQLDGNLFSGSIPEEIGNCSSLYLLSLSHNNLTGSIPKSMSKLSNLKILNLEFNELDGEIPQELGRLDTLLSANISYNRLEGRLPVGSIFPHLDKSSLQGNLGLCSPLLNGPCIMNVPKPLMLDPNAFGSQISHNDSDVSSLPKNGHRRSFFSISAIVAISAAFMIVIGVIVITLLNLSTRKRLEFVENALERTCSSSSRSESTPTGKLVLFDSKTSTDWISNPEYLLSKSCEIGEGVFGTVYKVPLGLQGKVVAIKRLVITNIIQYPEDFDREVRMLGKARHPNLIALKGYYWTPPMQLLVTEYAPNGSLQMKLHERLPTAPSVSWDNRFKILLGTAKGLAYLHHSVHPPIIHYNLKPNNILLDEDYNAKISDFGLARLLTELDKHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILEVVTGRRPVEYGEDNVVILSDLVRVLLEQGNVLDCVDQSMSEYSEDEILPVLKLAMVCTSQRPSARPSMAEVVQILEVIKVPPTQRMQLF* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01372 839 Gene3D Ribonuclease Inhibitor 1 159 IPR032675 -
Pte2g01372 839 CDD STKc_IRAK 558 826 - -
Pte2g01372 839 SUPERFAMILY L domain-like 5 241 - -
Pte2g01372 839 Gene3D Ribonuclease Inhibitor 160 440 IPR032675 -
Pte2g01372 839 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 826 - -
Pte2g01372 839 Gene3D Phosphorylase Kinase; domain 1 552 633 - -
Pte2g01372 839 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 546 629 - -
Pte2g01372 839 FunFam Inactive leucine-rich repeat receptor-like protein kinase 147 440 - -
Pte2g01372 839 Pfam Leucine Rich Repeat 57 79 IPR001611 GO:0005515
Pte2g01372 839 ProSitePatterns Protein kinases ATP-binding region signature. 558 581 IPR017441 GO:0005524
Pte2g01372 839 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 630 834 - -
Pte2g01372 839 Pfam Leucine Rich repeat 295 310 IPR001611 GO:0005515
Pte2g01372 839 SUPERFAMILY Protein kinase-like (PK-like) 553 830 IPR011009 -
Pte2g01372 839 Gene3D Transferase(Phosphotransferase) domain 1 634 836 - -
Pte2g01372 839 ProSiteProfiles Protein kinase domain profile. 552 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01372 839 FunFam Inactive leucine-rich repeat receptor-like protein kinase 48 146 - -
Pte2g01372 839 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Pte2g01372 839 SMART LRR_typ_2 175 199 IPR003591 -
Pte2g01372 839 SMART LRR_typ_2 55 78 IPR003591 -
Pte2g01372 839 SMART LRR_typ_2 367 391 IPR003591 -
Pte2g01372 839 SMART LRR_typ_2 296 319 IPR003591 -
Pte2g01372 839 SMART LRR_typ_2 79 103 IPR003591 -
Pte2g01372 839 SMART LRR_typ_2 271 295 IPR003591 -
Pte2g01372 839 SMART LRR_typ_2 127 151 IPR003591 -
Pte2g01372 839 Pfam Protein kinase domain 555 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01372 839 SUPERFAMILY L domain-like 162 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01372 Pte-Chr2 20235839 20239322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01372 1 836 Receptor kinase-like Gene Family AT3G28040 62.130 0.0 1014
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pte2g01372 Pkinase 5.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01372 - - qsa:O6P43_023626 1197.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01372 2 20235839 20239322 Pte2g01372 2 20235839 20239322 RCT