Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01370 ATGCTGACCGGCAGAGAAACTTTGATTCGATTGATCGGAAAATGTCGACGTTTCCTTCCCAACTATGAATCTCTCCTTTCCACCACCAACACAACTCAGAGCTCCTTGAATCTCTTTGGTGAAGAGGATGGAAGAATCTTTTTGGATGATATTGCACTGGACGAAGAATCGTTAGATTATAAGGTAGATGACTGTGAATCTAGTGGCCATGAAGTGAGACAGAATGATAACGGCAACGGGAACGGGTACGAGAATGGGGACCCTTATTCTTCTGATTGGGTAACTTGCCCTGTTTGCAGTGGTAAAATTCGTGGGGATGATTACGCAATTAATTCTCATCTCGATGCTTGCCTGTATAAGGGTAATAAACGAAAGCTCACCCAATGCACTCTCCTTCAGCTAAACTTCAATAAGAAACAGAAAGTCGAAACTTCAATGAACGACCCCTCAAGGTTATCTTCAGTCAATAGCTTACCATCACAGGTTTTCGTGCACAAAGGCCAACGTGAAAGTGGTGTACAAAATGCTTGCCACAACTCAATATCTGCCCCTGATCACAAAAAGGACAATAGCAGTGGAACAGAAAATCCCACCAATAATAACAAGATTGAACATGATGTTGTCCCAGGAATAAATTCAAGCGATGTATATGACAAGACACTTGAAACTTATATTGTTGGCCGTAGATATTCTGATCAAAAGGAGATAAATCCTGGTGCTGCTGTTTCCTTTATGCGTGATCCTCATAATGTGAAAGATTCTAATGCCATCAAGGTTCTCCATGCAGAGTCTGGTTCCTATGAAACTCTGGGCTTTCTTCCCCGAGAACTAGCTCAATACTTATCTCCTTTATTGGACAGCAATTTTTTAAGATTTGAGGGAAGTGTTGTTTCTCTTCCAATTCATCCTATGGGAGCGGTCCCAATTCAAGTTGTGTGTTGTAAAACCTCATCTGGTGAAATGGAGCATTTAGATGATGACCTTTTCCGGTGTTTGTGGGAAAATGCTTTACAAGTGGTTGAGTCTTCACCAACAATTCCACTGCCTTCTTGCAAGTATGTCCAGAACTTCCAGATTTTACTAGAAGAGGTTTTGAGAACTAATGGTCATCTTTTCAGTGAAGATGAAAAAAAATTCATGGAATCATTTGGTTTACTCTCAGAGTATAGTCAGAGACTCTTTCTTCGGCTTTACATGAGGAAAGGGCCTTGGTTTCAGGTCTCCAGTATTTCCTATCCTGACGTGCAGGATACTCAACAAGCAGTCAAGGAGCTTTCTGAGATAGGATATTTTTTTTCCACCAATGATACAAAGCAGCTGTGTCAGAGCGACTTGAAGGATATCTTGAATACACTAAAAGTAGCTGAGCTACGTGAAATATTTTGCATCATTAAGAAGAGTTGCAGCCTTTGTAAAAGAAAACAGGAGCTAATTACAACACTTCTTTCATTACATCCAGAAAGCCAGAGCCAACTCTTATCCACAGTTGTCCTTGATTGGGCTGGATCCTGTATAAGGATATCATCAAAAGCTGAATCCCTCATGTGGCGCGCCGAGAGGCTGTTCTTTCTGAACGGAGAGCAGGACTTAACGGCTTTTCTACTGGTTGATCTGGGAAAAGTGAAATATCCAATATACAATTGCATAATCACAAAACCAATTTTCCCCAACCGTGCAGAGCTCCTTGCTTATGAAGAGGCTATGGAAGTTGCTCAACTAACAAATGAATCACTGGATGGAAACAAAACCAATTCATTCTTGAGATGCATAAAGATTGCCGATTCTCATCTATCCACCTCTTCATTGCCAGTCCAATCTTCGGCATTAAATGTACTTTCTGCTCCAGGGATATACTCACAAGTGGTTGTGTTAGGAGTTTCCTTTCTTGAACAAGCACGGAGGTACAAAGATGCGATCCATTTGATAAAGCGGCTCTTGGAATGTTTTGGTAATGATGGAAGAAGAGGATATTGGACGCTGAGGTTATCCATTGATCTGGAGCACCTGGGTTGTCCAAATGAGAGCCTTTTAGTCGCTGAAAATGGATTGCTAGATCCATGGGTACGTGCAGGATCTAGAATGGCACTGCAAAGGAGGGTTCTTCGCCTAGGGAAACCGCCTAGGCGCTGGAAAATTCCTGGTTTTTCAAAGTCCCTTAAAAGACAGATTACTGAGGGAAAAAGGTTCACATTCAAGGGAGACCGTTGA 2208 0.418 MLTGRETLIRLIGKCRRFLPNYESLLSTTNTTQSSLNLFGEEDGRIFLDDIALDEESLDYKVDDCESSGHEVRQNDNGNGNGYENGDPYSSDWVTCPVCSGKIRGDDYAINSHLDACLYKGNKRKLTQCTLLQLNFNKKQKVETSMNDPSRLSSVNSLPSQVFVHKGQRESGVQNACHNSISAPDHKKDNSSGTENPTNNNKIEHDVVPGINSSDVYDKTLETYIVGRRYSDQKEINPGAAVSFMRDPHNVKDSNAIKVLHAESGSYETLGFLPRELAQYLSPLLDSNFLRFEGSVVSLPIHPMGAVPIQVVCCKTSSGEMEHLDDDLFRCLWENALQVVESSPTIPLPSCKYVQNFQILLEEVLRTNGHLFSEDEKKFMESFGLLSEYSQRLFLRLYMRKGPWFQVSSISYPDVQDTQQAVKELSEIGYFFSTNDTKQLCQSDLKDILNTLKVAELREIFCIIKKSCSLCKRKQELITTLLSLHPESQSQLLSTVVLDWAGSCIRISSKAESLMWRAERLFFLNGEQDLTAFLLVDLGKVKYPIYNCIITKPIFPNRAELLAYEEAMEVAQLTNESLDGNKTNSFLRCIKIADSHLSTSSLPVQSSALNVLSAPGIYSQVVVLGVSFLEQARRYKDAIHLIKRLLECFGNDGRRGYWTLRLSIDLEHLGCPNESLLVAENGLLDPWVRAGSRMALQRRVLRLGKPPRRWKIPGFSKSLKRQITEGKRFTFKGDR* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01370 735 Gene3D Classic Zinc Finger 91 120 - -
Pte2g01370 735 PANTHER FANCONI-ASSOCIATED NUCLEASE 1 4 725 IPR033315 GO:0004518|GO:0036297
Pte2g01370 735 MobiDBLite consensus disorder prediction 65 86 - -
Pte2g01370 735 SMART c2hc_5 93 118 IPR006642 GO:0003677|GO:0006281
Pte2g01370 735 Gene3D - 212 330 - -
Pte2g01370 735 SMART HIRAN_2 218 315 IPR014905 GO:0003676|GO:0008270|GO:0016818
Pte2g01370 735 MobiDBLite consensus disorder prediction 173 209 - -
Pte2g01370 735 MobiDBLite consensus disorder prediction 193 207 - -
Pte2g01370 735 MobiDBLite consensus disorder prediction 72 86 - -
Pte2g01370 735 Pfam HIRAN domain 220 299 IPR014905 GO:0003676|GO:0008270|GO:0016818
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01370 225 296 RAD5 or RAD16-like Gene Family AT5G05130 40.278 1.60e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01370 K15363 - qsa:O6P43_002562 758.444