Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01368 ATGGTTACGTTTACTAGATGTCTCTGTCCAGAGCCGTACCCAGAGGGCAACATGGAGTTCCTCAAGTCCAATGGAATCAAGCTTTATCAATTTGGGATTGAAGGTCACAAGGAACCTTTTGTAAACATCCCTGAGGATATGATCCGTGAAGCACTGAAAGTTGTACTTGATGTTAGGAACCACCCCATTTTGGTTCACTGTAAAAGGGGAAAGCATCGAACTGGTTGCGTTGTGGGATGCCTGAGGAGGATGCAAAAATGGTGCCTTACTTCTGTGTTTGATGAATATCAGCGGTTTGCAGCTGCCAAGGCAAGAATTTCAGATCAGAGATTCATCGAGTTGTTTGATATTTCAAAACTGAAAAACTTCCCAATCACATTTTCATGCCAAAAAGATTTTCACCCATGCCATTGTGCTGATCTGGGGTCCTCCCTTGCATCATTGGAGACGACCTTTTAG 459 0.4357 MVTFTRCLCPEPYPEGNMEFLKSNGIKLYQFGIEGHKEPFVNIPEDMIREALKVVLDVRNHPILVHCKRGKHRTGCVVGCLRRMQKWCLTSVFDEYQRFAAAKARISDQRFIELFDISKLKNFPITFSCQKDFHPCHCADLGSSLASLETTF* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01368 152 Pfam Tyrosine phosphatase family 8 121 IPR004861 -
Pte2g01368 152 ProSitePatterns Tyrosine specific protein phosphatases active site. 65 75 IPR016130 GO:0016311|GO:0016791
Pte2g01368 152 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 129 IPR020422 GO:0006470|GO:0008138
Pte2g01368 152 Gene3D Protein tyrosine phosphatase superfamily 3 119 IPR029021 -
Pte2g01368 152 PRINTS Plant and fungal dual specificity phosphatase signature 43 57 IPR020428 GO:0016791
Pte2g01368 152 PRINTS Plant and fungal dual specificity phosphatase signature 26 40 IPR020428 GO:0016791
Pte2g01368 152 PRINTS Plant and fungal dual specificity phosphatase signature 7 20 IPR020428 GO:0016791
Pte2g01368 152 PANTHER TYROSINE-PROTEIN PHOSPHATASE 7 121 - -
Pte2g01368 152 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 7 117 IPR029021 -
Pte2g01368 152 FunFam Tyrosine phosphatase, putative 5 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01368 Pte-Chr2 19967520 19969305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01368 8 133 Protein tyrosine phosphatase (PTP) family AT4G03960 72.222 2.05e-69 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01368 K18045 - gmx:100814279 238.81