Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01351 ATGAAAGAAGTTGTCAAATTGCCTCTGCTGTATCCTGAGTTTTTTGACAGCATGGGACTCACTCCTCCCAGAGGTGTTCTTTTGCATGGGTATCCAGGAACTGGGAAAACTCTAGTGGTGCGAGCACTGATTGGTGCATGTGCCCGTGGTGACAGAAGGATATCTTATTTTGCTCGAAAAGGTGCAGATTGCTTGGAAAAGTATGTTGGTGATGATGAGCGTCAATTGAGACTATTATTTCAGGTCACTGAGAAATGTCAGCCTTCAATAATATTCTTTGATGAGATAGATGGTTTAGCACCCTCAAGAACAAGACATCAAGATCAAACACATAACTCAGTTGTTTCAACATTGCTTGCTTTATTAGATGGTTTGAAATCTCGAGGTTCTGTTGTGGTTATTGGAGCAACAAATCGACCAGATGCTGTTGATCCTGCACTTCGGCGGACTGGAAGATTTGATCGGGAGATATATTTTCAAGATCATATATACTGTCAGGTTGATGAGATTCTTCATTGA 519 0.4123 MKEVVKLPLLYPEFFDSMGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDRRISYFARKGADCLEKYVGDDERQLRLLFQVTEKCQPSIIFFDEIDGLAPSRTRHQDQTHNSVVSTLLALLDGLKSRGSVVVIGATNRPDAVDPALRRTGRFDREIYFQDHIYCQVDEILH* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01351 172 ProSitePatterns AAA-protein family signature. 131 149 IPR003960 GO:0005524|GO:0016887
Pte2g01351 172 PANTHER AAA DOMAIN-CONTAINING 1 160 IPR045199 -
Pte2g01351 172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 160 IPR027417 -
Pte2g01351 172 FunFam ATPase family, AAA domain-containing 2 1 168 - -
Pte2g01351 172 SMART AAA_5 22 162 IPR003593 GO:0016887
Pte2g01351 172 Pfam ATPase family associated with various cellular activities (AAA) 26 160 IPR003959 GO:0005524|GO:0016887
Pte2g01351 172 Gene3D - 1 168 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01351 Pte-Chr2 18396035 18396649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01351 18 172 Calmodulin-binding Proteins AT3G56690 40.645 2.51e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01351 - - fve:105350813 296.975