Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01347 ATGGCTGCAAGGAAGACAGAGGTGAAATCCATCAATGCCATCAAGCCATCATCTCCCACACCTCCCCACCTCCAAACCTACAAACTCTCTTTCCTAGACCAGAGATCCCCAAACACCTTCTTCAACCTGAACTTCTTCTACCCTCCTGTTCATGCCATACCCAGCTCTGGCGACACGGCTAGTCAAGACCACATCACCCATTTCTATCACAGATCAAAGCTTCTTCAAGACTCACTTTCCGAAACACTTACACTGTTTTACCCTTTTGCAGGCAGATTTCAAGATGATGCCACCATCGTTTGCAATGATGAAGGAGTGGTTTTCATGGAGTCTCAAGCTAATTTCACCTTATCTGATATCCTAACTTCTCCTGACTTGTCCATCATTGACAGACATCTTGTTCCAACTATATCCCCAGAAGCAGCCAATGAAAGCTTCCATGGCTGCCAAATCCTAATCAACTTCATTCTATTTGCATGCGGTGGAACTGCCATTTGCATCGCCAACACACACAAGATTTCAGACCTGACAACTTGGATGACATTTCTCAATTGTTGGTGTGCTTCAAGCAGAGGCTTGGAGCCGTCGGTTATACCTGATTTGCACACCATACAAACAATCTTTCCTGCAAGAGGGGTACCCCAACAAATTCAGCACTCTGTCACTCGCTACAACACGAGCATGAGAAGATTCGTTTTCAGGGTCTCCAAAGTTCAGCAGCTCAAGTCGAAGCTGCTAAGCGATCTTAGGAATGATGGGTATGAAAATTTCTACCCTTCCCGTGTGGACGCAGTGACGGCACTCATATGGAGATGCCTTATGTGTTCCTCCAAACCCAAGACGCTTTCCTTTAAGCCATCGATTATGTTCAAAGCAGTTGATCCCCGTATGCGGATGGATCCACCGTTGTCCCGAAATGCAATGGGGAACTTGGCGTGGTTGCTTCCCATGATATGCGAGGAGGAGAGTGAGACTGAGCTGTGTGAGTTGCTCAAGAAGATGATGACATTGAAATTTTCACTTGAGAAGATGGGGAAGAAGTTCAATGGCGAACAGCTGGACGAGTTCTTGAAGGGTGAAGCAGAAGAAAGGAAGGAGATGTTTGACAAGTATAATGGTCAATTGGGGCTTTATGTTTGCACTACTTTCTGCAAATTTGGACAGTATGAGCTTGATTTTGCAGGAATGGGGAAACCGGTTTGGGTGACGAGTGTTGCTCCTGAGATATTCAAGAATTTCATTAATTTGACAGACACAAAAGTGGAGGGTGAAGTGGAAGCTTTGGTTTATTTGAATGAGGAAGATCTGAATGCATTTGCATCCAATGAGGAGTTGCTTCAGTTTGCTGAGCTTAATCCCTCTGTTATATGA 1371 0.4508 MAARKTEVKSINAIKPSSPTPPHLQTYKLSFLDQRSPNTFFNLNFFYPPVHAIPSSGDTASQDHITHFYHRSKLLQDSLSETLTLFYPFAGRFQDDATIVCNDEGVVFMESQANFTLSDILTSPDLSIIDRHLVPTISPEAANESFHGCQILINFILFACGGTAICIANTHKISDLTTWMTFLNCWCASSRGLEPSVIPDLHTIQTIFPARGVPQQIQHSVTRYNTSMRRFVFRVSKVQQLKSKLLSDLRNDGYENFYPSRVDAVTALIWRCLMCSSKPKTLSFKPSIMFKAVDPRMRMDPPLSRNAMGNLAWLLPMICEEESETELCELLKKMMTLKFSLEKMGKKFNGEQLDEFLKGEAEERKEMFDKYNGQLGLYVCTTFCKFGQYELDFAGMGKPVWVTSVAPEIFKNFINLTDTKVEGEVEALVYLNEEDLNAFASNEELLQFAELNPSVI* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01347 456 PANTHER F21J9.9 8 449 - -
Pte2g01347 456 Gene3D - 3 217 IPR023213 -
Pte2g01347 456 Gene3D - 225 448 IPR023213 -
Pte2g01347 456 Pfam Transferase family 6 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01347 Pte-Chr2 17980939 17982645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01347 73 311 Monolignol Biosynthesis Gene Families AT5G48930 25.191 3.35e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01347 - - qsa:O6P43_014533 390.963