Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01313 ATGACGCTAGAAGATTTCTTTACCTTGACTGAAATGAAAGATGGGCTTGCTGCTCCCTCTCGTGTGCAAGACTTGGTCTCCATTATGCAGAAGGACAAAACTTCTGTTATGAAAAACATAGGTGATGCGACGAGGCAGTGGGCTGCTGTTGCAAGCACCATTGCTGCCACTGATAATAAAGATTGTCTAGATGTATTTATTCAGTTAGATGGGCTTCAATTCATTGATAGATGGCTAAAAGATGCACAAAATTTTACTGTGGATGCAAATGACAGTTTTACTGAAGAGTCAATCACTGCTTTGTTGCGTGCACTGGAAAAGCTTAATATAGACGGTGAGAGATCGATATCTTCAGGAATTTGTGCTACTGTTAGAAGCCTGCTTGGCCATCATAGTTCTAGAGTTCAGGATAAAGCAAGAGCGTTGCTTGATGTTTGGAAAATTGATGAAAAAGGCGACTTGAAAAGTCCAAGTTTGGGGCTGGCCAAGGTCAATAGTGGGGATGAAAACCATGGCATGGAGGATGCTGTGGCAACTTCAGACGATGCTCTATCCAAAGAGAAGGGACAAGTGGAGTGTAATTTTTCAGGGCCTGGTAGAGGTGAAAACTCACCACCAAGGAGCATTGATAATATTCAACCAGAAAGGGTGGCCGATTTACTGAATCCTCGTTCTCCAATAGATGTAGTTAGTGTTGACACAAGAGATCAAAATGGGGATCATCTGAGTAATTGGAATAATTCTGTTCAATGTTCTCCTACAAAGAAAGGGTCACCTTTATGCCCTGAAGACAAGATTACTTCTGTTGGAACTTGTAGTTTTCCTGATTCAAGGCCAGGAGACACACAAGGACAGTCAGAAGTTTCTCAGCTGAAAGAAGCATCCAATAATGAAAAGCAAGTGCAAGAGTTCAGTCCTCTGCCAGAGCAACCAGGGAGTACAGAAGTTTCTCCTTCGTCCAAAAAGGTGGAACGTGGATCTGTTTCATTAATATCTGATGGGGGAAATGTTCAGAGATTGTTGAGAGAATCTACTTCACAAAAAAATGTTGGGGATTGCGAAAGTGGGACTTGTCAAAATGTTTCTTCTGTTGATGGCATGCCAATGACTGATATGGATAACATTAGAAATATCCAAGAGGTACCGGATGCAACTGGAAATGATGATAAGAGTTTTAATGCTTTGCATGATCTAATGGTTGGTAGCAACAAATCACGAAATTATGCAGAACTGGAAGCCTCTTTATCCAGAATTGCAAGTTCCAGAGTATTAGATGAAAAATTGGAGCGTGTTAGCAATGGAAGTGAGAATATGACTTGTAATTCTGACTCTGCCCCAGCAATGAGGGCTAAAAGTCAAAATGTAATCGACAAGAGAAGGTCTGACATTGAACTCGAGTATGGATTTGATGCTTTGCAAGTTGCTAGGCAAGTTGCACAAGAAGTGGAGAGAGAAGTTGGCGATCACAGAGAGCCATTCTGCAGTTCTTCTTCAGAGAAGATCTCTGAATGTGGTGGGATCAGACAACCAGGTAGCCCTGACTCTATAGGAAAACAAGACCTACCTGCTGAAGTTCTGCCAAAAGCATCATCAAGCACACATAGTGATTCTACTGAGGCATATTCTGCAGGGGAGGAGTGTGCAGCTAATTCAGAAAATTCAGAGCCCCGTGCTGTATTCACACTCAACATGGCTTCCTCATTGATTGCTGAAGCATCTCAAGAACCAGAGAACAAATCTGAACAAGGTCGTTGTATATTTGATCTTAATGAAGAAGTCTGCTCTGATGATATAGAGCTTCCTGTAAATGCAGCTTCTGCACACATTCCGGTTGTTTCTGCTCCAAGGCAGGCATCAACCTCTGGGTTACCTGCAGCCCCTTTACAGTTTGAGGGAGCGCTAGGATGGAAAGGATCAGCTGCTACTAGTGCTTTTCGTCCAGCTTCTCCTCGCAAGACTTCTGATTTGGATAAGAGTATTTCCTTGGATGGTACTTCGGAAACTTCTAAGCAGAGGCAGGGTGGCCTTGATATTGATCTTAATGTTGCCGAGGGCATTGATGGTTTGGAAAAGAAGACTGCAGTGGGATCTGGCCTTCCCTCGAGGGGATCTCATGTGGAAAAAAGGTCAGGCAAGCTCAACTTGGATTTAAATAGTATGAGTGATGATAGTGAAGCTCAACCATCAGATCCAAGGACGGAGAGACAGCAGCTTCACTGTAACCGAAATGGTAATCACAATGCATCACCGGCCTCCTCCTCATCAATCTTGCAACCTTCCATCAGAAACTTCGACTTGAATGGACCATATTCTCACAATGACATAGTGGAACAAGGGCAAGGTAAATCTTGTCTAGGCAATTCATATGAAAGGCCTACGTCAGATGCGCCTGTTATTTCTATCTTGGGTACTAGAGTAGAAGTCAATAAGAAGGAATACGCCCACTCCTCTCAGCTTTTATCCTTCCCTCATGGCAAAGCCATTGAACCCGCAATGGACTTTGGCAATGCCAGAGGCGGTGGAATTTTGGGGCTTGTTCCAACAGTGTCCTACAGTCATTCGCCAGTTTTTAGCTACAATGGACTGACTACAGCACCCAACATGTCTCTGTCTCCAGCCATTTATGGATCAGGTGGCACAATTCCATACATGGTGGACTCGAGAGGGTCCCCTGTCATGCCACAAATTATGGGTTCCAACTCGACGGTTCTTCCAGCCTACAGTCAACCTCCGTATGTCATGAACATGAGTGGTCTACAGCCTGGTTTGAATGGAGTTGGGCCTTCAAGACCACATTTGGACTTGAATTCTGGCTTCCTAATTGACGGTGGGAATAATGAATCTTTCAGGCAATTTCTTGTTCCAGGCGGAGGGATTACTCTGGAGGACCATCCAAGAAACATCCCACAGCCCTCTAGTTCTGGGATAGTAGGGAAAAGGAAGGAACCAGACAGCGGTTGGGAAAGCTACCCGTTTAACTACAAGCATCAGCAACCTCCGTGGAAGTAG 3009 0.4417 MTLEDFFTLTEMKDGLAAPSRVQDLVSIMQKDKTSVMKNIGDATRQWAAVASTIAATDNKDCLDVFIQLDGLQFIDRWLKDAQNFTVDANDSFTEESITALLRALEKLNIDGERSISSGICATVRSLLGHHSSRVQDKARALLDVWKIDEKGDLKSPSLGLAKVNSGDENHGMEDAVATSDDALSKEKGQVECNFSGPGRGENSPPRSIDNIQPERVADLLNPRSPIDVVSVDTRDQNGDHLSNWNNSVQCSPTKKGSPLCPEDKITSVGTCSFPDSRPGDTQGQSEVSQLKEASNNEKQVQEFSPLPEQPGSTEVSPSSKKVERGSVSLISDGGNVQRLLRESTSQKNVGDCESGTCQNVSSVDGMPMTDMDNIRNIQEVPDATGNDDKSFNALHDLMVGSNKSRNYAELEASLSRIASSRVLDEKLERVSNGSENMTCNSDSAPAMRAKSQNVIDKRRSDIELEYGFDALQVARQVAQEVEREVGDHREPFCSSSSEKISECGGIRQPGSPDSIGKQDLPAEVLPKASSSTHSDSTEAYSAGEECAANSENSEPRAVFTLNMASSLIAEASQEPENKSEQGRCIFDLNEEVCSDDIELPVNAASAHIPVVSAPRQASTSGLPAAPLQFEGALGWKGSAATSAFRPASPRKTSDLDKSISLDGTSETSKQRQGGLDIDLNVAEGIDGLEKKTAVGSGLPSRGSHVEKRSGKLNLDLNSMSDDSEAQPSDPRTERQQLHCNRNGNHNASPASSSSILQPSIRNFDLNGPYSHNDIVEQGQGKSCLGNSYERPTSDAPVISILGTRVEVNKKEYAHSSQLLSFPHGKAIEPAMDFGNARGGGILGLVPTVSYSHSPVFSYNGLTTAPNMSLSPAIYGSGGTIPYMVDSRGSPVMPQIMGSNSTVLPAYSQPPYVMNMSGLQPGLNGVGPSRPHLDLNSGFLIDGGNNESFRQFLVPGGGITLEDHPRNIPQPSSSGIVGKRKEPDSGWESYPFNYKHQQPPWK* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01313 1002 MobiDBLite consensus disorder prediction 693 756 - -
Pte2g01313 1002 MobiDBLite consensus disorder prediction 659 675 - -
Pte2g01313 1002 MobiDBLite consensus disorder prediction 429 453 - -
Pte2g01313 1002 Pfam TFIIS helical bundle-like domain 101 147 IPR017923 -
Pte2g01313 1002 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 150 IPR035441 -
Pte2g01313 1002 MobiDBLite consensus disorder prediction 489 553 - -
Pte2g01313 1002 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 17 151 IPR035441 -
Pte2g01313 1002 ProSiteProfiles TFIIS N-terminal domain profile. 73 151 IPR017923 -
Pte2g01313 1002 MobiDBLite consensus disorder prediction 433 449 - -
Pte2g01313 1002 MobiDBLite consensus disorder prediction 526 540 - -
Pte2g01313 1002 MobiDBLite consensus disorder prediction 959 1002 - -
Pte2g01313 1002 MobiDBLite consensus disorder prediction 181 210 - -
Pte2g01313 1002 MobiDBLite consensus disorder prediction 236 255 - -
Pte2g01313 1002 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 1002 - -
Pte2g01313 1002 MobiDBLite consensus disorder prediction 229 367 - -
Pte2g01313 1002 MobiDBLite consensus disorder prediction 642 676 - -
Pte2g01313 1002 MobiDBLite consensus disorder prediction 270 367 - -
Pte2g01313 1002 MobiDBLite consensus disorder prediction 740 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01313 Pte-Chr2 16114281 16119850 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pte2g01313 Med26 0.00015 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01313 - - qsa:O6P43_016284 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01313 2 16114281 16119850 Pte2g01313 2 16114281 16119850 RCT