Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01304 ATGGCTCTGTTAACTTTCTTGCCGGAGCAGATCACAGACCCCAAGAAACATCCTTCGAGACGCAAGCGCAGGCAGAAGAAACCACCATCTTCATGGGATCAGATAAAAAATCTGTTGATCTGCAAACAGATTGAAGGGTCCAGAGTGCATGACCCATCTAAAAGTACTTCAGAAGCGGGCTACTCAAAGTTAGGCTCTTCGTGCAGGTCTATATGTAGCTTCAAAGGCGTTGCTCATGGTAACACCCGTGTGATTCATAAATCTGATAATTCTTTGCCGGAGAGTAGCAGTCTAGGTCAGGAAACTGGGCTGCTGAAACGGAAAGCAGGAGCGAATGGCTCTTCAGCTCGGTCCGTATCAAGGTCAACGAGACCTCACGGTGAAGTGACGCAACCCTCGTGTTCCAGAGGAATGCAATTCAGGAAGCTTTCTGGATGTTATGAATGTCGCATGATCGTTGACCCCAGCAGACTTCCAATTTCAAGAACCACTATATGCGCCTGCTCTGTGTGCGGTGAGGTCTTCCCCAAGATGGAAAGCTTGGAGCATCATCAAGCTGCTCGACATGCTGTGTCGGAGCTGGGTCCAGAGGATTCGGGTCGAAACATAGTGGAGATCATCTTCAAATCGAGCTGGCTCAAGAAGGATAGCCCCATCTGTAAGATCGAACGGATATTAAAGGTCCACAACACTCAAAAGACCGTCCGACGGTTCGAGGACTGTCGAGACGCGGTGAAGGCACGCGCCCTCAGCAGCACGAAGAAGAACCCCAGGTGTGCAGCTGATGGGAACGAGCTTCTACGCTTTCACTGCACCACCTTGTCGTGCGCTCTTGGTGCACGTGGCTCTTCCTGCTTGTGCGGCAATGTACCAGGTTGTGGAGTTTGCACCATCATCAGGCACGGTTTCAAAGCCAAGAAGCAACCAGGTGGAGGGGATTGTGGCGGTAACGGAGGAGGAGGCAACTCTACTGCTGTTTCCGCTATCGGCGCCGGTGCTGGTGATGGCGACAGTCAATGCAAGGGAGTGCATACCACGGCCAGCAGCGGTAGGGCCCATGACTCCTTGAATTGCAGTGATGACAGAAGAGCCATGCTGGTCTGCCGTGTGATTGCAGGGAGGGTGAAGCGCGTGGAGGTTGGTGCCCCACAGGAGGAAGAGGCTGCTTTGTTGATCAGTTCATGCGATTCTGTGGCCGGCTACGCCGGGATTTACTCGAATCTTGAGGAGCTGATGGTTTTTAATCCCAGGGCTATACTTCCTTGTTTCGTAGTCATTTACACGGTCTTGCCATCATAG 1299 0.5212 MALLTFLPEQITDPKKHPSRRKRRQKKPPSSWDQIKNLLICKQIEGSRVHDPSKSTSEAGYSKLGSSCRSICSFKGVAHGNTRVIHKSDNSLPESSSLGQETGLLKRKAGANGSSARSVSRSTRPHGEVTQPSCSRGMQFRKLSGCYECRMIVDPSRLPISRTTICACSVCGEVFPKMESLEHHQAARHAVSELGPEDSGRNIVEIIFKSSWLKKDSPICKIERILKVHNTQKTVRRFEDCRDAVKARALSSTKKNPRCAADGNELLRFHCTTLSCALGARGSSCLCGNVPGCGVCTIIRHGFKAKKQPGGGDCGGNGGGGNSTAVSAIGAGAGDGDSQCKGVHTTASSGRAHDSLNCSDDRRAMLVCRVIAGRVKRVEVGAPQEEEAALLISSCDSVAGYAGIYSNLEELMVFNPRAILPCFVVIYTVLPS* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01304 432 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 194 IPR013087 -
Pte2g01304 432 Gene3D - 181 429 - -
Pte2g01304 432 ProSitePatterns Zinc finger C2H2 type domain signature. 166 189 IPR013087 -
Pte2g01304 432 MobiDBLite consensus disorder prediction 106 134 - -
Pte2g01304 432 MobiDBLite consensus disorder prediction 1 32 - -
Pte2g01304 432 SUPERFAMILY ADP-ribosylation 191 428 - -
Pte2g01304 432 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 30 427 - -
Pte2g01304 432 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01304 Pte-Chr2 15292163 15294549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01304 1 433 C2H2 Transcription Factor Family AT1G75710 59.221 3.51e-176 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte2g01304 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01304 - - csav:115701892 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01304 2 15292163 15294549 Pte2g01304 2 15292163 15294549 RCT