Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01291 ATGGATATTCACGGCGTGGTTTCTGAGAGAAAAGGTCAGAAAAGAAAACTGGAGGAAGAGATCGTCGAAGCACACACAGATCTCTCTTCTGAGTCCGTACCTACAGGCGATGCACGGGAAGCTTTGCTTAGCCAAGTGAGTGCTCAGGTTGATATACTCACCTCAACTTTCTCTTGGAAAGAAGCCGATCGAGCCGCTGCTAAGCGCGCTACTCATGTTATCGCAGAGCTTGCTAAAAATGAAGATATAGTGAACGTAATAGTAGAAGGAGGTGCTGTTCCGGCTTTGGTGAAGCATCTTGAAGCACCGCCTATTAGTGAAACTTATCGGAATCAGAAGCCATTTGAGCATGAGGTCGAGAAAGGGGCTGCTTTTGCTTTAGGACTTCTAGCTGTCAAGCCTGAGCACCAACAACTCATTGTGGATAAGGGTGCATTAACCCATCTCGTAGATTTGCTGAAGAGACACAGGAATAGCTCTGGATCACGTGCCGTGAATAGTGTGATTCGTAGGGCTGCTGATGCTATCACTAATCTTGCTCATGAAAACAGCTTTATTAAAACTAGTGTCAGGACGGAAGGTGGAATTCCTCCTCTTGTTGAGCTGCTCGAATTCACAGATGCAAAGGTGCAAAGAGCAGCAGCTGGTGCTCTTCGAACCCTTGCATTTAAAAATGATGAAAACAAAAATCAGATTGTTGAGTGCAATGCTCTCCCCACCCTTATCCTAATGCTTCGTAGTGAAGATGCTGCAATACATTATGAAGCAGTTGGTGTGATAGGAAATCTGGTGCATTCATCTCCCAAAATAAAGAAAGAAGTTCTACAAGCTGGAGCTTTACAACCTGTTATTGGTTTACTCAGTTCGTGTTGCTCAGAAAGCCAAAGAGAGGCAGCCTTGTTACTTGGACAATTTGCTGCGACCGATTCAGATTGTAAGGTCCACATTGTGCAGAGAGGTGCTGTCCGTCCTCTGATTGATATGCTTCAGTCCCCAGACTTTCAGCTTCAGGAGATGTCAGCATTTGCTTTGGGGAGGTTGGCACAGGACCCACATAACCAAGCTGGTATTGCACATAATGGTGGTTTAGCACCATTGCTTAAGCTTCTTGAATCAAAAAATGGATCATTGCAACATAATGCAGCATTTGCTCTGTATGGACTGGCAGATAATGAGGACAATGTGTCTGATTTTATTAGGGTAGGTGGTGTTCAGAAACTACAAGAGGGAGAATTCATTGTTCAAGCAACTAAAGATTGTGTAGCCAAGACATTAAAAAGACTGGAGGAGAAGGTACATGGCCGGGTCCTGAAGCATTTGTTATATCTTATGCGTATATCTGACAAGGCTGTTCAAAGACGTGTTGCTTTGGCTCTTGCTCATCTTTGCTTCCCGGAGGATCTGAAAAGCATATTCTTGGATGAGAATGGTTTGGAATTGCTTTTTGGACTTATATGTTCTTCTAATCACAAGCAGCAACAAGATGGTGCCGTTGCTTTATTCAAGTTGGCTAACAAAGCCATGACTCTATCTCCAGTTGATGCTGCCCCTCCTTCTCCTACACCTCAGGTCTATTTGGGTGAACAGTATGTTAACAATCCCACATTGTCTGATGTAACATTTCTAGTTGGAGGCAAGCGGTTTTATGCTCATAGAATCTGCCTGCTTGCTTCATCAGATGCGTTCCGTGCAATGTTTGACGGTGGATATCGTGAAAAGGATGCAAGGGATATAGAAATCCCAAATATTAAGTGGATAGTTTTCGAGATGATGATGAGATTCATATACACTGGCTCAGTTGATGTTACTCTGGAAATCGCACAAGATCTCCTTAGAGCAGCTGATCAGTATCTTCTGGATGGACTTAAACGACTGTGTGAGTACACTATTGCCCAGGATATATCATTAGAGAACGTATCAAGCATGTACGAGCTCTCGGAAGCCTTCAATGCGATATCTTTGAGACATGCATGCATCCTTTTTATTTTGGAGCAGTTTGATAAGTTCAACGCGCAGCCAGGGAATTCACATTTGATTCAGCGCATAATACCAGAGATGCGCAACTACTTTGCTAAAGCACTTCACAAGTGTAATTCACACAGCATTCGACTTTAG 2115 0.4355 MDIHGVVSERKGQKRKLEEEIVEAHTDLSSESVPTGDAREALLSQVSAQVDILTSTFSWKEADRAAAKRATHVIAELAKNEDIVNVIVEGGAVPALVKHLEAPPISETYRNQKPFEHEVEKGAAFALGLLAVKPEHQQLIVDKGALTHLVDLLKRHRNSSGSRAVNSVIRRAADAITNLAHENSFIKTSVRTEGGIPPLVELLEFTDAKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPKIKKEVLQAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIDMLQSPDFQLQEMSAFALGRLAQDPHNQAGIAHNGGLAPLLKLLESKNGSLQHNAAFALYGLADNEDNVSDFIRVGGVQKLQEGEFIVQATKDCVAKTLKRLEEKVHGRVLKHLLYLMRISDKAVQRRVALALAHLCFPEDLKSIFLDENGLELLFGLICSSNHKQQQDGAVALFKLANKAMTLSPVDAAPPSPTPQVYLGEQYVNNPTLSDVTFLVGGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIKWIVFEMMMRFIYTGSVDVTLEIAQDLLRAADQYLLDGLKRLCEYTIAQDISLENVSSMYELSEAFNAISLRHACILFILEQFDKFNAQPGNSHLIQRIIPEMRNYFAKALHKCNSHSIRL* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01291 704 Pfam BTB/POZ domain 530 632 IPR000210 GO:0005515
Pte2g01291 704 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 361 403 IPR000225 GO:0005515
Pte2g01291 704 SMART BTB_4 537 634 IPR000210 GO:0005515
Pte2g01291 704 Gene3D - 413 519 IPR011989 -
Pte2g01291 704 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 320 362 IPR000225 GO:0005515
Pte2g01291 704 Gene3D - 11 162 IPR011989 -
Pte2g01291 704 SUPERFAMILY ARM repeat 434 505 IPR016024 -
Pte2g01291 704 ProSiteProfiles BTB domain profile. 537 604 IPR000210 GO:0005515
Pte2g01291 704 CDD BTB_POZ_ARIA_plant 524 639 - -
Pte2g01291 704 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 7 698 IPR044282 -
Pte2g01291 704 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 91 145 IPR000225 GO:0005515
Pte2g01291 704 SUPERFAMILY ARM repeat 50 409 IPR016024 -
Pte2g01291 704 Pfam Armadillo/beta-catenin-like repeat 309 348 IPR000225 GO:0005515
Pte2g01291 704 Pfam Armadillo/beta-catenin-like repeat 190 222 IPR000225 GO:0005515
Pte2g01291 704 Pfam Armadillo/beta-catenin-like repeat 225 264 IPR000225 GO:0005515
Pte2g01291 704 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 194 229 IPR000225 GO:0005515
Pte2g01291 704 Gene3D - 264 412 IPR011989 -
Pte2g01291 704 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 236 278 IPR000225 GO:0005515
Pte2g01291 704 Gene3D Potassium Channel Kv1.1; Chain A 520 663 IPR011333 -
Pte2g01291 704 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 144 194 IPR000225 GO:0005515
Pte2g01291 704 SUPERFAMILY POZ domain 528 631 IPR011333 -
Pte2g01291 704 Gene3D - 163 263 IPR011989 -
Pte2g01291 704 SMART arm_5 309 349 IPR000225 GO:0005515
Pte2g01291 704 SMART arm_5 267 307 IPR000225 GO:0005515
Pte2g01291 704 SMART arm_5 350 390 IPR000225 GO:0005515
Pte2g01291 704 SMART arm_5 465 505 IPR000225 GO:0005515
Pte2g01291 704 SMART arm_5 225 265 IPR000225 GO:0005515
Pte2g01291 704 SMART arm_5 133 181 IPR000225 GO:0005515
Pte2g01291 704 SMART arm_5 80 132 IPR000225 GO:0005515
Pte2g01291 704 SMART arm_5 183 223 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01291 Pte-Chr2 15144694 15151866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01291 287 507 U-box Gene Family AT2G23140 26.957 6.23e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pte2g01291 BTB 1.4e-25 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01291 - - qsa:O6P43_021592 1174.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01291 2 15144694 15151866 Pte2g01291 2 15144694 15151866 RCT