Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01287 ATGGCGTCTCGCTCTTCAATAGCGGTTGATGAGGGAACACATAGGAGGGCTTGCGTAAATGATGCACCTGCCCTGAAACTTGCTGACATTGGATTTGCTATGGGTATAACAGGAACAGAGGTTGCAAAAGAGGCTTCCGACATGGTGCTGGCAGATGATAATTTCAGCACCATTGTATCAGCTGTTGTAGAGGGTCGCTCCATTTATGACAATATGAAAGCATTTATTAGGTATATGATATCATCCAATGTTGGAGAAGTAATATCCATATTCTCAACTGCTGCACTGGGAATTCCAGAATGCATGATACCTGTGCATCTTCTGTGGGTGAATCTGGTTACTGATGGCCCCCTGCAACTGCTCTTGGTTTCAATCCAGCAGATGCTGACATAA 393 0.4453 MASRSSIAVDEGTHRRACVNDAPALKLADIGFAMGITGTEVAKEASDMVLADDNFSTIVSAVVEGRSIYDNMKAFIRYMISSNVGEVISIFSTAALGIPECMIPVHLLWVNLVTDGPLQLLLVSIQQMLT* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01287 130 SUPERFAMILY HAD-like 19 119 IPR036412 -
Pte2g01287 130 Gene3D - 19 60 IPR023214 -
Pte2g01287 130 NCBIfam HAD-IC family P-type ATPase 19 103 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01287 130 PRINTS P-type cation-transporting ATPase superfamily signature 15 34 - -
Pte2g01287 130 PRINTS P-type cation-transporting ATPase superfamily signature 39 51 - -
Pte2g01287 130 PANTHER CALCIUM-TRANSPORTING ATPASE 19 123 - -
Pte2g01287 130 Gene3D - 61 122 - -
Pte2g01287 130 PRINTS H+-transporting ATPase (proton pump) signature 15 31 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01287 130 PRINTS H+-transporting ATPase (proton pump) signature 47 72 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01287 Pte-Chr2 14891815 14892370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01287 19 117 Primary Pumps ATPases(2) AT4G00900 94.949 2.38e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01287 K01537 - rvl:131307385 186.422