Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01264 ATGACTTCGTTTTCAAGGGAACAGAAACTTACTTCTCATCATGCTGGAAATATTTTGATGTATCTCAATCAAACTTCTTCCGGTACCTACTCAGATATGCTGTCTGGGAATTCTATATTGCCTCATAACTATTCCGAATCTGTTGGAGGCCAAAATGAGAAGTTTATCGCAGCTACAGCTACAGCTGACACAGTGAACATGCAATCGGTTGGTGGGCATTCCAATAATGAACATGCCATGTTAATTTCAAGGGGACTGCTGAATTGTGAGCAGAATATTCATTCTCATGGGTTATCTCTAAGTCTTGGGTCGCATATGCCTTCTGCTGGTCCTGTTCCGTCCTTTCAATCCCAGTATTCCTATCCTGCTCAATCCTCACTGTTCAATCCTTCTCATTCAATTTCTCAGAAGGGGGCAATGCCACAGAAATATGAAGAGACCCCCCTTCATAAGGATTTGAGAAGTACTGAATGCATGTCTTATGGGGTCTCTTGCAGCAGCGAAAGTTCACTCAGAGCAGAGGCTTTGTGCAATCCTAATTCATCGGTACGCGCTTCAGAAATACTCTCTGATCCGTTAATGCACGGAGGACAAGGCTATGAGAATACTATCTTGAATTCAAAATATCTTAGGCCAGCACAAGAGTTGCTTGATGAGATGGCCAATGTACAAAAGGCATTGAAGCGGTCAGGATCAGGAAAAAATAAGATGTCACATGAAAATTGTTCAGATGGCCCCCATGAAAAATTGAATAGCCGATCTCAACAGACATCGTCAAATTCTGGAATCCCAACTTCCAACTCATCCATAAGTGAGCTATCACCTGCTGAACGACAAGATTTACTGGATAAGAAGGCAAAACTTATGTCCATGTTAGATGAGGTTGATGAGAAATACAGACAATACTGCCACGAAATGCAAATTGTAGTTTCATCATTTGACATGGTTGCTGGATGTGGAGCAGCTGAGCCCTACACTGCACTTGCATTGCGAACTATCTCCCGGCACTTTCGATGTCTACGTGATGCCATTAGTGGACAGATTCAACTAGTTCAGAGAAAACTTGGGGAGCAAGAGGGGATACCTCGTCTCCGTTATGTAGACCAGCAGCTGAGACAACAGAGATCTCTCCAGCACCTTGGTGTGATCAGACAGGCTTGGAGGCCACAGAGGGGACTTCCTGAAAGCTCTGTGTCAGTCCTACGTGCTTGGCTATTTGAACATTTCCTTCATCCGTACGTCACATGCTTAATTTCTCAATCTTCCTTGTTAATTCTTTCCAAAGAAGAGTATTCACTCGTTTCCTTCTTTCTTCCCTATGTAACCAGTTACCCTAAGGATTCTGAGAAACTTATGCTAGCAAGGCAGACAGGATTGTCCAGAAACCAGGTAGCCAATTGGTTCATTAATGCACGCGTTCGTCTTTGGAAGCCTATGATTGAAGAAATGTATCAAGAAGAGTTTGGCGAGTCTGAAATGCTCGGCAGTTTTTCACAGGAAAATACACCAAAGAAAAGCTCAAGAGATGATGGTGGTGGTGCAGCCAAGGATGGAGAGAAAGAATATCAGAAAGCAATGCCTGGAAGCCCTCCTTATGTCCACATGAGTCAGTTTAATCATACATCTACTTTACAAATGGATGAACGGGCAAGCAGGGTGGAGTTTCTAACCAGCACTCATGGAGATGATGCAGTAGGTACTAAAACTTCAAAATCACCCGACAAAAATAACTTTTATTCAGTTAAAAGTATGCCATCGAATACTATAGAGGATGGCGATCTTATGAGTACTGCTGGTGCCCCATATGATTTATCAGAATTGGGTCATTTAGCCATGAATGGTCAGGTGTCACTTGCACTTGAGTTACGAAATTGTGAAAGTGATGGTTATCATGGGTCTGGTGCGATCAACAAAAGTGTTAATGAAACTTCATCTTTTCCAGGAGACAATGATTTGTTGGACTATCATTTCATGGACCCCGGAAAGGAGCAACAAAGGTTTGGTAATCCTCATCTGTTACACGAATTTGTAGTGTAA 2037 0.4261 MTSFSREQKLTSHHAGNILMYLNQTSSGTYSDMLSGNSILPHNYSESVGGQNEKFIAATATADTVNMQSVGGHSNNEHAMLISRGLLNCEQNIHSHGLSLSLGSHMPSAGPVPSFQSQYSYPAQSSLFNPSHSISQKGAMPQKYEETPLHKDLRSTECMSYGVSCSSESSLRAEALCNPNSSVRASEILSDPLMHGGQGYENTILNSKYLRPAQELLDEMANVQKALKRSGSGKNKMSHENCSDGPHEKLNSRSQQTSSNSGIPTSNSSISELSPAERQDLLDKKAKLMSMLDEVDEKYRQYCHEMQIVVSSFDMVAGCGAAEPYTALALRTISRHFRCLRDAISGQIQLVQRKLGEQEGIPRLRYVDQQLRQQRSLQHLGVIRQAWRPQRGLPESSVSVLRAWLFEHFLHPYVTCLISQSSLLILSKEEYSLVSFFLPYVTSYPKDSEKLMLARQTGLSRNQVANWFINARVRLWKPMIEEMYQEEFGESEMLGSFSQENTPKKSSRDDGGGAAKDGEKEYQKAMPGSPPYVHMSQFNHTSTLQMDERASRVEFLTSTHGDDAVGTKTSKSPDKNNFYSVKSMPSNTIEDGDLMSTAGAPYDLSELGHLAMNGQVSLALELRNCESDGYHGSGAINKSVNETSSFPGDNDLLDYHFMDPGKEQQRFGNPHLLHEFVV* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01264 678 SUPERFAMILY Homeodomain-like 436 486 IPR009057 -
Pte2g01264 678 Coils Coil 278 298 - -
Pte2g01264 678 ProSiteProfiles 'Homeobox' domain profile. 433 478 IPR001356 GO:0003677
Pte2g01264 678 MobiDBLite consensus disorder prediction 494 532 - -
Pte2g01264 678 Pfam Associated with HOX 204 345 IPR006563 -
Pte2g01264 678 SMART prehox3 198 346 IPR006563 -
Pte2g01264 678 SMART HOX_1 387 482 IPR001356 GO:0003677
Pte2g01264 678 CDD homeodomain 442 479 IPR001356 GO:0003677
Pte2g01264 678 Pfam Homeobox KN domain 444 474 IPR008422 GO:0003677|GO:0006355
Pte2g01264 678 Gene3D - 390 483 - -
Pte2g01264 678 MobiDBLite consensus disorder prediction 503 523 - -
Pte2g01264 678 MobiDBLite consensus disorder prediction 227 275 - -
Pte2g01264 678 MobiDBLite consensus disorder prediction 248 275 - -
Pte2g01264 678 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 126 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01264 Pte-Chr2 14332412 14337309 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01264 199 679 Homeobox Transcription Factor Family AT2G16400 42.105 5.34e-105 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pte2g01264 POX 4.9e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01264 - - gmx:100775682 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01264 2 14332412 14337309 Pte2g01264 2 14332412 14337309 RCT