Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01263 ATGGATCTTGTACAAAGTCCGTCCTTTACTGAAGGCTCAGAGGTTAGCCAAACCAGACACTTTATGAATATGCTTGGAGCTGCCAATGAGAACAACCAGCAAGCACAGGGGCTTTCACTGTCTCTAGGTTTTCACGCCTTTGCTCCTCCTGGTCATTACAAGGAGAGGCCCCAGCTGAATCCTGATCTCATGAACCCACACTATTTTATGAGCGGAGGACAAGAAAACAGAGAAGCTTGTTATCCAGGAAGAGGTCAACCGACCAATGAGTACTCTATTTTCGATAATATTAGTCAATTAAACATGGCTGCTTCTGCTTCAACTTCTTATGGGATTGAGTCTCTTGCTGCTGTTATTGGGAAATCTAGGTACTTAAAACCAGTACAATCACTTCTAGAGGAATTTTTTGATGGCGGTAGAAACATGGTTAGAAGCATTCATGAAAATCACACTGGCAAATTATTTCACGAGACTAGAATAGGAGCTGTAAGACTCTCCTCCGAGTCAAAAGCAGAGTTCTTCAACATTAGGCCTTTTTCTGGCGATAACCTCAACCTGAAATTGAAACTCTCGAAGCTGGTTGCCTTGTTCGATGAGGTAGAGAGTAGATACGAGAAGTACCTCCATCAGATGGAAGAAGTAGTGTCGTCATTTGAGATGATCGTAGGTCTAGGAGCTGCAAAGTGTTACACTACGTTAGCACTTGAAGCCATGTCCAAACATTTCTGCAGCTTAAGGGAAGCCATCATTTTTCAAATAAATGTGGAGAAGGGAAAGATTTTGGCAGACTTGACAAAAATTAACTCTGGATTACCAGAAATCGGCTTATTTGACAGAGAAGGTAGACAGATTAGATTGCCTCTTCAACAGCTTGGTATGATACAAAGCCAACCCCAAGTATGGAGACCCATCAAAGGGTTACCAGAGACATCTGTTGCCATACTTCGTTCTTGGCTCTTCGAGCACTTCCTTCATCCTTATCCTAACGACAATGAGAAGCTTACGTTGGCATCACAAACCGGTCTGTCCAAGAATCAAGTTTCAAATTGGTTCATTAATGCTAGAGTTCGGTTATGGAAACCTATGATTGAAGAGATGTACAAAGATGAATTTGGTGACTCATCAGAAGACTCAGCCAACAATAGCACAGCCAAAGAAGGCAACGCTGATTAG 1173 0.4237 MDLVQSPSFTEGSEVSQTRHFMNMLGAANENNQQAQGLSLSLGFHAFAPPGHYKERPQLNPDLMNPHYFMSGGQENREACYPGRGQPTNEYSIFDNISQLNMAASASTSYGIESLAAVIGKSRYLKPVQSLLEEFFDGGRNMVRSIHENHTGKLFHETRIGAVRLSSESKAEFFNIRPFSGDNLNLKLKLSKLVALFDEVESRYEKYLHQMEEVVSSFEMIVGLGAAKCYTTLALEAMSKHFCSLREAIIFQINVEKGKILADLTKINSGLPEIGLFDREGRQIRLPLQQLGMIQSQPQVWRPIKGLPETSVAILRSWLFEHFLHPYPNDNEKLTLASQTGLSKNQVSNWFINARVRLWKPMIEEMYKDEFGDSSEDSANNSTAKEGNAD* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01263 390 Gene3D - 298 376 - -
Pte2g01263 390 SMART HOX_1 301 365 IPR001356 GO:0003677
Pte2g01263 390 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 48 382 - -
Pte2g01263 390 SMART prehox3 113 251 IPR006563 -
Pte2g01263 390 ProSiteProfiles 'Homeobox' domain profile. 320 361 IPR001356 GO:0003677
Pte2g01263 390 MobiDBLite consensus disorder prediction 370 390 - -
Pte2g01263 390 CDD homeodomain 307 362 IPR001356 GO:0003677
Pte2g01263 390 MobiDBLite consensus disorder prediction 376 390 - -
Pte2g01263 390 Pfam Homeobox KN domain 318 357 IPR008422 GO:0003677|GO:0006355
Pte2g01263 390 Pfam Associated with HOX 118 249 IPR006563 -
Pte2g01263 390 SUPERFAMILY Homeodomain-like 307 369 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01263 Pte-Chr2 14328774 14330547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01263 35 376 Homeobox Transcription Factor Family AT1G19700 41.389 1.01e-78 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pte2g01263 POX 7.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01263 - - zju:107435472 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01263 2 14328774 14330547 Pte2g01263 2 14328774 14330547 RCT