Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01258 ATGGCCTCCCCTAGCGGAAATTCTTCAGGATCCTCTAAGATTCAGAACTCTGGTTCTGAAGAAGATCTGCAACTGTTGATGGATCAAAGGAAAAGGAAAAGAATGCTGTCAAATCGTGAATCGGCAAGGCGATCTCGAATGAGAAAACAGAAGCATCTGGATGATCTGATGGCGCAGGCGAATGAGCTCAGAAAGGAGAACAGTCAAATTCTCAACAGCATAAACGTCACCACTCAGCACGTGCACAAAGTCGAGTCGGAGAATTCCATTTTGAGGGCTCGCATGGCCGAGCTGACTCAAAGGCTGCAATCTCTCAACGAAATCTTGAGCTACATCAACAGCAATACCACTGCTAATGGATTCTACGAATCGGATCACGCCTTTCCAAATGGTCCCGACAACTTCATCAACTCCACGAACATGCTTTACCTTAACCAACCTATCATGGCTTCTGCGGATGTGTTTCGTTACTGA 474 0.462 MASPSGNSSGSSKIQNSGSEEDLQLLMDQRKRKRMLSNRESARRSRMRKQKHLDDLMAQANELRKENSQILNSINVTTQHVHKVESENSILRARMAELTQRLQSLNEILSYINSNTTANGFYESDHAFPNGPDNFINSTNMLYLNQPIMASADVFRY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01258 157 Gene3D - 28 79 - -
Pte2g01258 157 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Pte2g01258 157 CDD bZIP_plant_GBF1 31 82 IPR045314 GO:0003700|GO:0006355
Pte2g01258 157 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Pte2g01258 157 MobiDBLite consensus disorder prediction 1 51 - -
Pte2g01258 157 Pfam bZIP transcription factor 30 88 IPR004827 GO:0003700|GO:0006355
Pte2g01258 157 Coils Coil 46 73 - -
Pte2g01258 157 PANTHER BZIP TRANSCRIPTION FACTOR 44 7 153 - -
Pte2g01258 157 MobiDBLite consensus disorder prediction 24 51 - -
Pte2g01258 157 MobiDBLite consensus disorder prediction 1 23 - -
Pte2g01258 157 FunFam BZIP transcription factor 28 79 - -
Pte2g01258 157 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Pte2g01258 157 Coils Coil 81 108 - -
Pte2g01258 157 SUPERFAMILY Leucine zipper domain 30 84 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01258 Pte-Chr2 14232403 14233480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01258 26 158 bZIP Transcription Factor Family AT4G34590 55.072 6.85e-45 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte2g01258 bZIP_1 4.3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01258 K25786 - rcu:8275772 211.46