Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01256 ATGGAATCTGCAAATCTTCATCATCAACAACATCAGCTTCAAGACCATTTGGATGCTGGCACTGCTTCTCTAGCGACCCCATCTTGTTATGGAGATGGAAGCAACTATGATTGGCTACCCAACATCACTTTAAATGCAGGTAATATAAACCCAAATTTTCAAGAAGCCATTCCAAATGCAAGGGACTTGATGTTAAAGAATAATGCTACAAAGATCCCTCCTTTTAATAATTTCTTGATCCAAGATTTAGGTCATCAATGGATTAATGGGGATGATAGAGGAAGTTGCTTAAGGAACGAGCCTTCACCTGAGCTTCCGGAAATAAAAGAAGAAAGCAATATTAGTTCAGATACTTACCCAAGGTTCAATGACATTATACACAGTTCCTCGAGGATGATGGACTACACGATTTCTCAAACGAGAAACAACATTGAGAGCAACCACATGGATCTGAATACTAATGTTACTGATAATAGCTATAATTGTTTTGTTGGCATGGGAAGTAGAGGAAACTTCAGCCAGATTTATCCAAGTGTGAATGTGTCAAACCAGCTGAACCCTTCATTCTCAGCTACGCCAAGACTCTTAGACATGAACATGCAAGCCTTGGATGGTCTGTTAAATTCCACAGCCAAAGGAGTGGCTGGGAGTTTGCACCAACGCTACTCACATAATGATCTCACTAAACTAACAGATCATTTTCAGCTGCACACAAATCACCGCTCTTCATATGGTGATTCTACTTTAACTAAATCGCAGTTGGCAAACGGTTTTCCAGAAACTAAAAGACTCTTCATCTCGGTGGAGCCAAAGACTCCTTCCTCTACAACTGCGAACAAGAAATCAAGATTATTGGAATCGCGAGCTCCATGCCCACACTTCAAGGTTAGAAAGGAAAAACTGGGAGATAGAATTGCAACTCTTCAACAGTTGGTGGCCCCCTTCGGCAAGACAGACACAGCTTCTGTACTTATGGAGGCTATCGGATATATCAAGTTCCTTCAAAACCAAGTCGAGACGCTAAGTGTGCCATACATGAAATCAAGAAGCGACCAAACACGTAGAGCTCTGCAAGGGGATCCAAATGCAGAAGATAAAGGGGAGGCCAGGCGAGATCTTCGAAGCCGAGGGCTTTGTCTGGTGCCTTTGTCATGCATGACATATATAACCGGTGAGGGCAGCAATGGAGGATTCTGGCAACACTCACATTTTGGTGGGGGAACATTGTAA 1230 0.426 MESANLHHQQHQLQDHLDAGTASLATPSCYGDGSNYDWLPNITLNAGNINPNFQEAIPNARDLMLKNNATKIPPFNNFLIQDLGHQWINGDDRGSCLRNEPSPELPEIKEESNISSDTYPRFNDIIHSSSRMMDYTISQTRNNIESNHMDLNTNVTDNSYNCFVGMGSRGNFSQIYPSVNVSNQLNPSFSATPRLLDMNMQALDGLLNSTAKGVAGSLHQRYSHNDLTKLTDHFQLHTNHRSSYGDSTLTKSQLANGFPETKRLFISVEPKTPSSTTANKKSRLLESRAPCPHFKVRKEKLGDRIATLQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSRSDQTRRALQGDPNAEDKGEARRDLRSRGLCLVPLSCMTYITGEGSNGGFWQHSHFGGGTL* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01256 409 FunFam Transcription factor bHLH123 family 295 357 - -
Pte2g01256 409 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 295 348 IPR036638 GO:0046983
Pte2g01256 409 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 285 334 IPR011598 GO:0046983
Pte2g01256 409 MobiDBLite consensus disorder prediction 348 371 - -
Pte2g01256 409 Gene3D - 295 358 IPR036638 GO:0046983
Pte2g01256 409 CDD bHLH_AtbHLH_like 294 342 IPR045239 -
Pte2g01256 409 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 138 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01256 Pte-Chr2 14164841 14168222 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01256 27 408 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 37.671 4.69e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01256 - - pvy:116127494 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01256 2 14164841 14168222 Pte2g01256 2 14164841 14168222 RCT