Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01243 ATGGCCTCAGGTTCATCATGGACGCCAAAGCAAAACAAAATGTTTGAGAATGCTTTGGCCATCTATGACAAGGACACCCCAGAGCGCTGGCAGAACCTAGCTAGTGCGGTCGGAGGGAAGACAGTTGAAGAAGTTAAAAAACACTACGAGATTCTTGTGGAAGACGTGAAGCTAATTGAGAAAGGCCAAGTGACTCTCCCCAATTACAGATCAATGACTTCAGCAGGGGCTACCAATGCTTATGTTTACACTGATGAAGATCAAATTTAA 270 0.4444 MASGSSWTPKQNKMFENALAIYDKDTPERWQNLASAVGGKTVEEVKKHYEILVEDVKLIEKGQVTLPNYRSMTSAGATNAYVYTDEDQI* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01243 89 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 5 79 IPR044636 GO:0003700
Pte2g01243 89 SMART sant 3 55 IPR001005 -
Pte2g01243 89 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
Pte2g01243 89 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Pte2g01243 89 CDD SANT 6 49 IPR001005 -
Pte2g01243 89 Gene3D - 1 66 - -
Pte2g01243 89 FunFam Transcription factor SRM1 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01243 Pte-Chr2 13858645 13858914 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte2g01243 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01243 - - cave:132185613 134.035